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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr5g048350.2 |
Common Name | MTR_5g048350 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
bHLH |
Protein Properties |
Length: 327aa MW: 36018.9 Da PI: 7.2845 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr5g048350.2 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.5 | 8.8e-12 | 46 | 82 | 2 | 42 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKae 42
r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + a+
Medtr5g048350.2 46 RSKHSVTEQRRRSKINERFQILRDLIPQC----DQKRDTAS 82
899*************************9....56655555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MKAGKVNHEE DEYDDDEFNS NKKQATSSVP NTNKDGKATD KASVIRSKHS VTEQRRRSKI 60 NERFQILRDL IPQCDQKRDT ASFLLEERVQ KYEGSYQGWS QEPSKLMPWR NSHWRAQNFV 120 GQPPIVKNGS GPVLPFPGKF DENSVGISPT MLSGSHNMID HDPTRDIVGK TAERQPDLAS 180 KGIPLPMAMH ANMSVPVRSD GVLSHPLQGT VSDAQSTECP TTSEQLNQQD DLTVEGGTIS 240 ISSVYSQGLL NNLTQALQSA GLDLSKANIS VQIDLGKRAN KDPSGTASSP KNHDNPLCCN 300 QSFAHFRDGG NREDSDQAQK RMKTYK*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help
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Source |
Description |
UniProt | Positive brassinosteroid-signaling protein. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT053019 | 0.0 | BT053019.1 Medicago truncatula clone MTYFL_FM_FN_FO1G-B-11 unknown mRNA. |
GenBank | BT133588 | 0.0 | BT133588.1 Medicago truncatula clone JCVI-FLMt-12L3 unknown mRNA. |