|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Medtr5g048350.1 |
Common Name | MTR_5g048350 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
|
Family |
bHLH |
Protein Properties |
Length: 336aa MW: 37155.2 Da PI: 7.0112 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr5g048350.1 | genome | Mt | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 51.1 | 2.4e-16 | 46 | 95 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + a+ L +++eY+++Lq
Medtr5g048350.1 46 RSKHSVTEQRRRSKINERFQILRDLIPQC----DQKRDTASFLLEVIEYVQYLQ 95
899*************************9....9*******************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MKAGKVNHEE DEYDDDEFNS NKKQATSSVP NTNKDGKATD KASVIRSKHS VTEQRRRSKI 60 NERFQILRDL IPQCDQKRDT ASFLLEVIEY VQYLQERVQK YEGSYQGWSQ EPSKLMPWRN 120 SHWRAQNFVG QPPIVKNGSG PVLPFPGKFD ENSVGISPTM LSGSHNMIDH DPTRDIVGKT 180 AERQPDLASK GIPLPMAMHA NMSVPVRSDG VLSHPLQGTV SDAQSTECPT TSEQLNQQDD 240 LTVEGGTISI SSVYSQGLLN NLTQALQSAG LDLSKANISV QIDLGKRANK DPSGTASSPK 300 NHDNPLCCNQ SFAHFRDGGN REDSDQAQKR MKTYK*
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Positive brassinosteroid-signaling protein. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT053019 | 0.0 | BT053019.1 Medicago truncatula clone MTYFL_FM_FN_FO1G-B-11 unknown mRNA. |
GenBank | BT133588 | 0.0 | BT133588.1 Medicago truncatula clone JCVI-FLMt-12L3 unknown mRNA. |