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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr4g065870.1 |
Common Name | MTR_4g065870 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
bHLH |
Protein Properties |
Length: 434aa MW: 47463.5 Da PI: 6.4411 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr4g065870.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 38.6 | 1.9e-12 | 367 | 412 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR +i +++ +L++l+P+ +k + +++L +AveYIk+Lq
Medtr4g065870.1 367 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTSDMLDLAVEYIKDLQ 412
689*********************7....688*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 434 aa
Download sequence Send
to blast |
MESDLQQHPT MFLDHQNHHH QQQMNSGLTR FKSAPSSYFS NIIDKEFYEH LFNRPSSPET 60 ERVFARFMNS LSGSGGSGGG GGGDAESVSV TASIAPITDS VVDSLTQQLP IVKEEIDQQS 120 QTMQTMNNNN NNNNNEAVDL PQLQRQQSNN MSNYGSSAAP QSFYHNSGRP PLPNQMKTGR 180 SNLIRHGSSP AGLFSNINID TGFAAMRGIG TMGAANSTSK EANFSSSVVR LKNAPNYASA 240 LGAEIGSNSI PQNNLEPEGF AETRGNDFIP GFPLGTTWED TAMISDNITG LKRYRDDDDV 300 KPFPPGLNPA ETKNETGGQT TSAPLAHQMS MPNTTAELAA IEKFLQFSDS VPCKIRAKRG 360 CATHPRSIAE RVRRTKISER MRKLQDLVPN MDKQTNTSDM LDLAVEYIKD LQNQVETLSD 420 NRAKCTCSHK QQQ*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031118 | 1e-120 | KT031118.1 Glycine max clone HN_CCL_179 bHLH transcription factor (Glyma11g13960.1) mRNA, partial cds. |