PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr2g075400.1
Common NameMTR_2g075400
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family BES1
Protein Properties Length: 518aa    MW: 57133.5 Da    PI: 9.3589
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr2g075400.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8221952.6e-6021171116
           DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspessl 94 
                      ++++r ptwkErEnnkrRERrRRaiaaki++GLR++Gn++lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kple+++++g s+ asp+ss+
  Medtr2g075400.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFRLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLENMDMVGGSSAASPCSSY 95 
                      5899*****************************************************************************************9 PP

           DUF822  95 qsslkssalaspvesysaspks 116
                      + s+ ss+++sp +s  a  ++
  Medtr2g075400.1  96 HPSPGSSSFPSPSSSPYAANRN 117
                      9888888777777664443333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.3E-574131IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNF RLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPLENM DMVGGSSAAS PCSSYHPSPG SSSFPSPSSS PYAANRNADG  120
NSLIPWLKNL STASSSGSSP KLPHPYFHSG SISAPVTPPL SSPTSRTPRL NADFDDQSAR  180
PGWTGQHYSF LPSSGPPSPA RQIVDPEWFA GIKLPHASPT SPTFNLVSRS PFAFKEDGFS  240
GGGSRMWTPG QSGACSPAIA AGFDQTADIP MSEAISDEFA FGSNTFGIVK PWEGERIHEE  300
FVADDLELTL GNSKTRNVNI NLCCKPPRTP LQVIGSSVAR YNKSHMIEVQ GLLRSKTKKK  360
HKYNQETKGV IRQVKQMKVV FGLQEVLEVV NNGIEVLPTN SHIDGKNKDG KTLFYIHKCV  420
GNKVFEKIVD ANTSMEVWDT LVKYDGGDAK VKKMDEKIAY YFSTLVTITN QMKQCSDIMT  480
HQVEDIQGTL EAHEMKITKR GNERQEEQAN FSKFKKD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.94022e-71leaf| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr2g075400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2076010.0AC207601.5 Medicago truncatula chromosome 2 BAC clone mth2-45c5, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024631617.10.0BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-121BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLG7IR040.0G7IR04_MEDTR; Brassinazole-resistant 1 protein
STRINGAES665250.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.16e-97BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]