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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Medtr2g011070.1 |
Common Name | MTR_2g011070 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family |
bHLH |
Protein Properties |
Length: 417aa MW: 46385.5 Da PI: 4.8693 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Medtr2g011070.1 | genome | Mt | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 16.9 | 1.1e-05 | 306 | 343 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
R +++ +++ L++l+ + +K + a++L +A+eYIk L
Medtr2g011070.1 306 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 343
677888999*******998.....8****************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0042631 | Biological Process | cellular response to water deprivation |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus |
GO:0071472 | Biological Process | cellular response to salt stress |
GO:2000214 | Biological Process | regulation of proline metabolic process |
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MAEEFHAGIC GETWWNINNS TRSVFPLMMN SSSTCSVAAN DVGNYSTWQN DFLGLKETIR 60 TCSDIEVNNF DVSDCSLSFL DPQKPQIMGF DLLSPTSSNW NQSLFNDSQI QKEWSTKNLS 120 STSGSQVSRM DQEFSLEQQN MNSGLSCGYP IGSVNNSYNY PSSLIQSLFD PELQPEPQPQ 180 PQNSLFTNPS MSSSYSSSSN ELSPTWTSLM KHSMPKQQLS GLLFSNNTPF WNASADALND 240 IRAGVFVSSQ PQHQSPNFED NKFNSPNTLL NKLKRDKSPE TKNSSETAVK RPRIETPSPL 300 PTFKVRKEKL GDRITALQQL VSPFGKTDTA SVLHEAIEYI KFLHDQVNVL STPYMKSGSP 360 IQHQQDCDNV NESEGKKQDL RSQGLCLVPI SSTFPMTNET PVDFWTPTFG GPLFGR*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC187543 | 0.0 | AC187543.3 Medicago truncatula strain A17 clone mth2-74p6, complete sequence. |