PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0073s0051.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 582aa    MW: 62174 Da    PI: 4.6
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0073s0051.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08449490955
                          HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           r RR+ri +++  L++l+P       +K++ a++L +A+ Y+k+L+
  Mapoly0073s0051.1.p 449 ARHRRERISDRIRVLQRLVPGG-----TKMDTASMLDEAISYVKYLK 490
                          699*****************87.....8*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.663440489IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.89E-11442494No hitNo description
Gene3DG3DSA:4.10.280.101.1E-12442498IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.2E-13444498IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-13446495IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-6450489IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010197Biological Processpolar nucleus fusion
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    Send to blast
MDTIQGMDAG DLLFSAPLSS ALDSSKFWSG IKMESPFHGD STTMINNNAN SNNGSCVASY  60
IQAMEGQAKF PANQPLKYSP ADALGLMDMD QAKCGFSTVT STQRNQFVRP LDDAIETFGL  120
DADMELINRM PFGSWNQARL SGELPAQSKP GMCRYPSEIS DDSSLDGGLP ASSTVSSTSD  180
GLASREDLDD DVYVEGGSTN AELPSLSNIT LNSPRLLQQR SKIGMASPGS EGSAQSADQA  240
GSDSRDCSLR EMENQLVDRT VMEANAAADL TSLQNTALEN PDIAVLVPQD VKENERPPPT  300
SGMDLKWKHE APVLDVSENW NSKKLKSSPP SSPTASPGLA VPFLAPPLAA SLNGMNVNPS  360
SAPFLMSSNV RSIYQMQQPV LAGLGAPADL TKVAGPSAKG GLMANMAPHH LLFGPNFPAI  420
ANLDPAAIEN SRPKRRNVKI SKDPQSVAAR HRRERISDRI RVLQRLVPGG TKMDTASMLD  480
EAISYVKYLK LQVQTLESCG NAGFDPRMPY PAYYMPVRSA QGDCSTMSQI SPGGGSADLG  540
SLSLALSSRD GEIQSAEQSE QVWLLLMMMM EETRMVTVVP L*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WMU90.0A0A2R6WMU9_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7611568
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.15e-24bHLH family protein