PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.15G143500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | G2-like | ||||||||
Protein Properties | Length: 408aa MW: 45382.5 Da PI: 6.5222 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.9 | 9.3e-33 | 263 | 318 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Manes.15G143500.1.p 263 KQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 318 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.115 | 260 | 320 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.87E-18 | 260 | 321 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.9E-30 | 261 | 322 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.6E-27 | 263 | 318 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.4E-8 | 265 | 316 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence Send to blast |
MGSVPPDLSL DFRPTYVPKT ISDFLKEVSL IGDVSEKVSK LDGFVKGLEE EMNKIDAFKR 60 ELPLCMLLLN DAILFLKAES IQYAASNNPP ILEEFIPLKK NCDDDDDDDE QDGRINKEKD 120 SRDKKNWMSS VQLWNTNDHP STNYIFDKKQ SLKLESKITK RGNQYEKEDT FQVCNSRSAA 180 RAFMPFKTYS GLSRNDDNDN NSNGELPVPG LSLLTPGIKN FREESSSTSS RISCSRAVSS 240 SAPNPHSNLQ NGPQPHQQQT ARKQRRCWSP ELHRRFVNAL QQLGGSQAAT PKQIRELMQV 300 DGLTNDEVKS HLQKYRLHTR RMPPATAASA NQSVVVLGGL WMSKDQYGDS MKATSSQSGS 360 PQGPLQFAGN TGGTSTTGGD SMEDDEDAKS EGYSWKSHIH RSVKDDV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 1e-14 | 263 | 316 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-14 | 263 | 316 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-14 | 263 | 316 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-14 | 263 | 316 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.15G143500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021593446.1 | 0.0 | transcription factor HRS1-like | ||||
TrEMBL | A0A2C9UGY5 | 0.0 | A0A2C9UGY5_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_030151m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1208 | 34 | 107 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37180.2 | 2e-56 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.15G143500.1.p |