PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G089600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 571aa    MW: 63233.6 Da    PI: 9.6143
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G089600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH57.13.2e-18265314255
                          HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          r +h++ E+rRR++iN++f++Lrel+P+     ++K +Ka+ L +++eYI+ Lq
  Manes.14G089600.1.p 265 RSKHSATEQRRRSKINDRFQKLRELIPHG----DQKRDKASFLLEVIEYIQFLQ 314
                          889*************************7....7*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.107.1E-25260335IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-19261332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.149263313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.70E-15265318No hitNo description
PfamPF000101.4E-15265314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-14269319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MELPQQQRLF ETEGRKPAHD FLSLCSHSIV QQDPKPHSQG YLKTQDFLRP LERIGKVTAK  60
EETTVDISLL EKPLPPAPPP SVGHILPGGI GTFSISHVSN CFNQRISKPE SSAIFTVARA  120
SSTEKNEEDS NCSSYTGSGF TPWEESALKK GKTRKEKEEE RSNTVRETAA KAKAGHWTSS  180
DRPSPSSTNT HRNSFSSLSS SKPSGKKGQS FLEMIKSAKD SADDDNLDDE EKFVLKKETP  240
SPIHKGELRV KVDEKSTDHK TNTPRSKHSA TEQRRRSKIN DRFQKLRELI PHGDQKRDKA  300
SFLLEVIEYI QFLQEKVQKY EGSYQGWNDE PAKLVPWRNG NRPSESCVDQ PRGMNSGAGP  360
ALLFAAKFDE KNINIVPTIP GNTRNPVESD MNSTSAFELL DQHPGITNKA MSFPMPLQPN  420
FFNSSRTGGA VAQVPPRLIS DAENRTSQSQ PQNQTHHTRS FTNNGAVAID KLKEKELSIE  480
GGTINISSAY SQGLLNTLTQ ALQSCGVDLS QASISVQIEL GKRPNKRPIT PTSIFKDNEI  540
PSNNQGTIWP RVSSGEESHQ ALKKLKTRKS *
Functional Description ? help Back to Top
Source Description
UniProtPositive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation. {ECO:0000269|PubMed:15680330}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G089600.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by cold treatment. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021592601.10.0transcription factor BIM1-like
SwissprotQ9LEZ31e-109BIM1_ARATH; Transcription factor BIM1
TrEMBLA0A2C9UL380.0A0A2C9UL38_MANES; Uncharacterized protein
STRINGcassava4.1_004528m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72523145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.41e-100bHLH family protein
Publications ? help Back to Top
  1. Liang T, et al.
    UVR8 Interacts with BES1 and BIM1 to Regulate Transcription and Photomorphogenesis in Arabidopsis.
    Dev. Cell, 2018. 44(4): p. 512-523.e5
    [PMID:29398622]