PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.13G091600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family EIL
Protein Properties Length: 484aa    MW: 55120.8 Da    PI: 4.8529
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.13G091600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN33965.1e-121303471353
                          XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                          ++lkkrmwkd m++++lke++k      e+    ++s   +e++rrkkmsraQD+iLkYM+k+mevcnaqGfvYgi+pekgkpv+g+sds
  Manes.13G091600.1.p  30 DDLKKRMWKDSMRMQKLKEKRKT----DEP----HESLAKQEASRRKKMSRAQDSILKYMVKIMEVCNAQGFVYGIVPEKGKPVTGSSDS 111
                          79****************99997....455....3344569************************************************* PP

                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS
                 EIN3  91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180
                          Lr+WWke+v+fd+n+p ai++      +l++++    ++ s  h l++lqDTtlgSLLsalmq c ppqrrfple+g++pPWWPtG e+w
  Manes.13G091600.1.p 112 LRQWWKEDVRFDQNAPLAITEFF---PLLEKHEV---DPVSCMHLLHDLQDTTLGSLLSALMQSCIPPQRRFPLERGLAPPWWPTGGEAW 195
                          ********************983...35554444...589************************************************** PP

                          HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXX CS
                 EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkq 270
                          wge+g+s+++g+ppykkphdlkkawkvsvL+avikhmsp+++++r+l+ qsk+lq km+akes ++++v+nqee +          l   
  Manes.13G091600.1.p 196 WGEQGASQEHGAPPYKKPHDLKKAWKVSVLAAVIKHMSPNFDRMRRLVTQSKCLQAKMTAKESTTWSKVVNQEETLS--------IL--T 275
                          *************************************************************************9743........11..2 PP

                          XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
                 EIN3 271 spkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                          ++ + ++ +++         + ++v  +    +++v++krk  ++++a+v +    + cq+ ++++se  l+f dkns+++++
  Manes.13G091600.1.p 276 QTCLRIDAGEE--------DHYESVTHDFGSYDLQVNEKRKCTFEREASVDKG---YACQNLECPRSEEGLGFLDKNSRTDHQ 347
                          22334444422........2223344445556899*****9877777777544...9***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.6E-11530269No hitNo description
Gene3DG3DSA:1.10.3180.104.3E-67145272IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.62E-59148271IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MVKFHGEEDV DLPISFQEGG SEDEDEISYD DLKKRMWKDS MRMQKLKEKR KTDEPHESLA  60
KQEASRRKKM SRAQDSILKY MVKIMEVCNA QGFVYGIVPE KGKPVTGSSD SLRQWWKEDV  120
RFDQNAPLAI TEFFPLLEKH EVDPVSCMHL LHDLQDTTLG SLLSALMQSC IPPQRRFPLE  180
RGLAPPWWPT GGEAWWGEQG ASQEHGAPPY KKPHDLKKAW KVSVLAAVIK HMSPNFDRMR  240
RLVTQSKCLQ AKMTAKESTT WSKVVNQEET LSILTQTCLR IDAGEEDHYE SVTHDFGSYD  300
LQVNEKRKCT FEREASVDKG YACQNLECPR SEEGLGFLDK NSRTDHQVTC AYRLKEIDSS  360
STQENSDGNF SDLSTSLLPF YDQPLISPRS MTAAMDNNRD LLSVIDWANT DIDPKGDHVA  420
EIVEESAGFK MVEDYLNFGG TGIEDYPNYR NTGTEQRQTE NMGMNQRTDD QGIITSIWDL  480
GFE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-561462721127Protein ETHYLENE INSENSITIVE 3
4zds_B2e-561462721127Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14868KRKTDEPHESLAKQEASRRKK
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.13G091600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021632559.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-134EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2C9US900.0A0A2C9US90_MANES; Uncharacterized protein
STRINGXP_002533137.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-136EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]