PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.11G161500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bZIP | ||||||||
Protein Properties | Length: 491aa MW: 54210.9 Da PI: 7.2546 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.4 | 2e-10 | 187 | 228 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L Manes.11G161500.1.p 187 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDL 228 6889*************************9877777766666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.5E-6 | 184 | 247 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.186 | 186 | 230 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-7 | 187 | 229 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-7 | 188 | 231 | No hit | No description |
CDD | cd14708 | 1.62E-20 | 188 | 234 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.4E-8 | 189 | 232 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 191 | 206 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.5E-32 | 268 | 343 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence Send to blast |
MASHGVGETG LSDSGPSNHH LPYAAIHGIN PPSTSFFNQE GSPFDFGDLE EAVLQGVKIR 60 NDEAKAPLFR PAATLEMFPP WPLRFQQTPR GSSKSGGESS DSGSPVNTLS SKAAAQLDPE 120 SPISKKASPS DHQAFDQKHL QLQQHHQQIE MASDTSRTGG PSELNPSSAN TPQEKRKGSI 180 SEKQLDAKTL RRLAQNREAA RKSRLRKKAY VQQLESSRIK LTQLEQDLQR ARQQGLFLGG 240 CGGGGNISSG AAIFDMEYGR WLDEDQRHMS ELRTGLQAHL SDGDLRVIVD RYISHYDEIF 300 RLKGVAAKSD VFHLITGMWS TPAERCFLWM GGFRPSELIK MLTSQLDPLT QQQLMGIYSL 360 QHSSQQAEEA LSQGLEQLQQ SLVDTIASGP VVDGMQQMAV ALGKLSNLEG FVRQADNLRQ 420 QTLHQLRRIL TVRQAARCFL VIGEYYGRLR ALSSLWASLP RESLVGEENT CQTTSDLQMV 480 QPPQNHFSNI * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.11G161500.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021628660.1 | 0.0 | transcription factor TGA9-like isoform X3 | ||||
Swissprot | Q93XM6 | 0.0 | TGA9_ARATH; Transcription factor TGA9 | ||||
TrEMBL | A0A2C9V3E9 | 0.0 | A0A2C9V3E9_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_006319m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4555 | 33 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 0.0 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.11G161500.1.p |
Publications ? help Back to Top | |||
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