PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.05G032600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | MYB_related | ||||||||
Protein Properties | Length: 499aa MW: 56430.4 Da PI: 6.3396 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.3 | 3.5e-08 | 393 | 442 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +++WT+ E+ +++ v++ ++ W+ I rt++ +R +++++s+++++ Manes.05G032600.1.p 393 KLSWTEAEERKFKAIVQLNPSSlgkcFWDEIFRTFP-TREREDLVSYYFNV 442 689***************99889999**********.***********996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51156 | 9.455 | 294 | 335 | IPR000949 | ELM2 domain |
SMART | SM01189 | 5.9E-4 | 296 | 347 | IPR000949 | ELM2 domain |
CDD | cd00167 | 1.87E-4 | 395 | 443 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 499 aa Download sequence Send to blast |
MGGVLELGSE FKGLFSNITD WKSVLNVSAK VDSNREEKCI VDDEESVHID TGRSVVNFVE 60 VGKLSYNVAK NMGPDYFSDR HNNCKDFQEN LQSNSTSVKL CSEGDVKGAM VGMDGGKRDE 120 NVDENEVMVL DSDAVEEFIL GRKRKRESMC RVVNWITGIA RNPCDCVVDS LPERSKWDSY 180 GNGELWKQVL LVREALFLKR HVDSSAEKST CQSLQKNRKM HPCMYDDQVG STYNFRERLK 240 CSKKLLHKKN VFQAESCSEL SSSTTETDSD SCTKGIRDGD SSTKHSAVDL PVEKSIPLGP 300 DFQAEIPEWT GVIPESDPKW AGTRVWPPEK VDSRLIIERE PIGKGRQDSC GCEVPKSVEC 360 VRFHNAERRL KVKRELGAGF LHWRFDKMGE DVKLSWTEAE ERKFKAIVQL NPSSLGKCFW 420 DEIFRTFPTR EREDLVSYYF NVFLLQRRAQ QNRVTPNNID SDDDESECGL ATNSSRREAP 480 KSPGSLLYSA KKPRKNVG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 367 | 374 | RRLKVKRE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.05G032600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021613859.1 | 0.0 | AT-rich interactive domain-containing protein 1-like | ||||
Refseq | XP_021613860.1 | 0.0 | AT-rich interactive domain-containing protein 1-like | ||||
Refseq | XP_021613861.1 | 0.0 | AT-rich interactive domain-containing protein 1-like | ||||
Refseq | XP_021613863.1 | 0.0 | AT-rich interactive domain-containing protein 1-like | ||||
Refseq | XP_021613864.1 | 0.0 | AT-rich interactive domain-containing protein 1-like | ||||
Refseq | XP_021613865.1 | 0.0 | AT-rich interactive domain-containing protein 1-like | ||||
Refseq | XP_021613866.1 | 0.0 | AT-rich interactive domain-containing protein 1-like | ||||
TrEMBL | A0A251KSS3 | 0.0 | A0A251KSS3_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_003489m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4373 | 17 | 24 |
Link Out ? help Back to Top | |
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Phytozome | Manes.05G032600.1.p |