PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G015800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 397aa    MW: 45385.3 Da    PI: 5.521
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G015800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.1e-14203254155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Manes.05G015800.1.p 203 QRMTHIAVERNRRRQMNDHLNSLRSLMPPS---YVQRGDQASIIGGAIDFVKELE 254
                          79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.32E-12201258No hitNo description
SuperFamilySSF474594.97E-17202270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.669202253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-14203268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-11203254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.9E-11208259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MERLQGLFDP CFLGEQLDAE GLERGFVNTE NLRTFEEEET QFSMPSLEDK IPFLQMLQGV  60
EYPPFFPLKE PNFQTLLKLQ HLKRPWNNYI TEADTQVQAL ELESCVTHDI ADLHSPAKSE  120
TKDFQNPHSN SCLEDVSPEP KRQANLIGRF CKERNSDSSF PWTHPQTMLH ETHFSKTSPV  180
VTKERKKRKR TRPTKNKEEV ENQRMTHIAV ERNRRRQMND HLNSLRSLMP PSYVQRGDQA  240
SIIGGAIDFV KELEQLLQSL EAQKRMRKTE EAVAAMGMTS NWLFTSQAEC NIQGESGNCE  300
EEAKVKRKSE AAEIEVTVIK NHVNLKIQSE KKAGQLLRAI VALEDLRLTV LHLNITSSEN  360
TVLYSFNLKI EDDCKLESAD EIAATVDEIF TIINGN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184189RKKRKR
2185190KKRKRT
3203214RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G015800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021611710.10.0transcription factor bHLH67-like
TrEMBLA0A2C9VSG30.0A0A2C9VSG3_MANES; Uncharacterized protein
STRINGcassava4.1_009158m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61950.16e-79bHLH family protein