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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C023880P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
LBD |
Protein Properties |
Length: 222aa MW: 24271.1 Da PI: 4.1797 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C023880P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 116.3 | 1.9e-36 | 12 | 112 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+C aCk+lrrkC+++Cv+ap f ++ +++fa+vhk+FGasnv+kll +lp+++r++a+ +++yeA r+rdP yG++++i++lqq++ +l++e+
MELO3C023880P1 12 SCGACKFLRRKCSDQCVFAPFFSYDEaTSHFAAVHKVFGASNVSKLLLHLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFALQQEVVSLQEEI 106
6**********************98868******************************************************************* PP
DUF260 95 allkee 100
+ l+++
MELO3C023880P1 107 EILGSQ 112
999887 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MTGLNSSTTS SSCGACKFLR RKCSDQCVFA PFFSYDEATS HFAAVHKVFG ASNVSKLLLH 60 LPTHTRSHAA ITVAYEALER MRDPTYGCIA HIFALQQEVV SLQEEIEILG SQIANLATTG 120 GSIAAVENPF IDQVVQVSQQ MDGFEMTNTN YYQNELASEL PYQSFDNIQN DNTAQMISPL 180 FCLGEEDGVF EFCNSNNVVE STSAFDVSVE ENCVGYPWIV G*
|
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By auxin. {ECO:0000269|PubMed:17259263}. |