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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MELO3C022315P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
MIKC_MADS |
Protein Properties |
Length: 190aa MW: 21751.9 Da PI: 4.9747 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C022315P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 81.5 | 5.6e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
k ie+ nr+vtf+kRr g+lKKA ELSvLCd+ev +i+f ++g+lye++s
MELO3C022315P1 9 KLIEDRCNRHVTFCKRRSGLLKKARELSVLCDVEVGIILFTNRGRLYEFCS 59
569**********************************************96 PP
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2 | K-box | 17.2 | 2.1e-07 | 119 | 167 | 24 | 75 |
K-box 24 LkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellle 75
Lkk+++++q++ + + ++L++ ++ qLe+qLe l ki+s++ e ++e
MELO3C022315P1 119 LKKQLQTIQSQ---VEEPNFKKLDITQMVQLENQLEGTLDKIKSQRIEAMIE 167
56655555554...77778999**************************9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MGRKKIEVKL IEDRCNRHVT FCKRRSGLLK KARELSVLCD VEVGIILFTN RGRLYEFCSG 60 NSLLNIIMRY QSHLQGRNES PIDNDLQGRS ESLIDSDAKD HVSDETILDV SDETILVSLK 120 KQLQTIQSQV EEPNFKKLDI TQMVQLENQL EGTLDKIKSQ RIEAMIENDD CWTYDMEIAM 180 GMINSPPFN*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1tqe_P | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
1tqe_Q | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
1tqe_R | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
1tqe_S | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
6c9l_A | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
6c9l_B | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
6c9l_C | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
6c9l_D | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
6c9l_E | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
6c9l_F | 2e-16 | 1 | 86 | 1 | 84 | Myocyte-specific enhancer factor 2B |
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