PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C008082P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family ERF
Protein Properties Length: 149aa    MW: 16269.2 Da    PI: 6.7804
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C008082P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.5e-161262155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +++kGVr++k +g+Wv+eIr+p   g +  r +lg++ ++e Aa a++ a  +l+ 
  MELO3C008082P1 12 KKFKGVRQRK-WGKWVSEIRVP---G-SqDRLWLGSYSSPEAAAVAHDVAYYCLRR 62
                    59*******9.**********8...4.35************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.38E-241272No hitNo description
SMARTSM003802.7E-241378IPR001471AP2/ERF domain
PfamPF008471.3E-81361IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.3E-241372IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-161372IPR016177DNA-binding domain
PROSITE profilePS5103220.4681372IPR001471AP2/ERF domain
PRINTSPR003671.8E-71425IPR001471AP2/ERF domain
PRINTSPR003671.8E-73652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MASSSNSLGE IKKFKGVRQR KWGKWVSEIR VPGSQDRLWL GSYSSPEAAA VAHDVAYYCL  60
RRPSNLDHLN FPPMVLPLTN HLLIRDDMSP GSIQRAASDA AMAVDAQYIC NSLADRGSSG  120
RAGAFQASGD DQYTAFNNDQ DLSIQDYL*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818150.0LN681815.1 Cucumis melo genomic scaffold, anchoredscaffold00008.
GenBankLN7132570.0LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008441160.11e-107PREDICTED: ethylene-responsive transcription factor ERF019
SwissprotO805421e-39ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A1S3B2T21e-105A0A1S3B2T2_CUCME; ethylene-responsive transcription factor ERF019
STRINGXP_008441160.11e-106(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.12e-34ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]