PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C002681P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family BES1
Protein Properties Length: 328aa    MW: 35364.4 Da    PI: 8.8004
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C002681P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822208.61.7e-6421471150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r+ptwkErEnnkrRERrRRaiaaki+ GLR++Gnyklpk++DnneVlkALc eAGw+ve+DGttyrkg+kp  e +++g sas sp+ss+q
  MELO3C002681P1   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPV-ERNIMGGSASGSPCSSYQ 95 
                     5899************************************************************************.999*************** PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa.....asllpvlsvlslvsssl 150
                             +sp++sy++sp+sssfpsp+s+  ++++++     +sl+p+l++ls+ sss+
  MELO3C002681P1  96 --------PSPRASYNPSPASSSFPSPKSSRYAMNSNDngtdpNSLIPWLKNLSSGSSSA 147
                     ........9*****************99887776665568999**********9977764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.3E-653141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FLGLRMYGNY KLPKHCDNNE VLKALCDEAG  60
WTVEEDGTTY RKGCKPVERN IMGGSASGSP CSSYQPSPRA SYNPSPASSS FPSPKSSRYA  120
MNSNDNGTDP NSLIPWLKNL SSGSSSASSR LPHHLFINCG SISAPVTPPS SSPTARTPRK  180
PNDWDNHPAV APAWAAQRFS CLPTSTPQSP GRQVLADPAW LDSIRIPQSG PSSPTFSLVA  240
RNPFGFKEAM SAGVSRNWTP TQSGTCSPTV AAGIDHTSDV PMTDGTATDF AFGSCSIGLV  300
KPWEGERIHE ECISDDLELT LGNSSTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-24685372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-24685372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-24685372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-24685372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819320.0LN681932.1 Cucumis melo genomic scaffold, anchoredscaffold00001.
GenBankLN7132660.0LN713266.1 Cucumis melo genomic chromosome, chr_12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008443587.10.0PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-120BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1S3B7X40.0A0A1S3B7X4_CUCME; BES1/BZR1 homolog protein 4
STRINGXP_008443587.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-91BES1/BZR1 homolog 4