PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000808238

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

Dof

Protein Properties

Length: 292aa MW: 32366.8 Da PI: 7.948

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000808238	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	111.7	3.5e-35	46	104	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + + lkcprC+stntkfCyynny+ sqPr+fC+aC+r+WtkGG+lrnvPvGg rknk+ MDP0000808238 46 QAEPLKCPRCESTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGG-VRKNKRL 104 56789*********************************************97.5666654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	9.0E-23	48	103	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.2E-31	49	102	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	26.906	50	104	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	52	88	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence Send to blast
MGLSTKQVNS DGLDWSQTSL LQAQTFQLPK PPTAVRRQLQ QNQQQQAEPL KCPRCESTNT 60 KFCYYNNYNK SQPRHFCRAC KRHWTKGGTL RNVPVGGVRK NKRLKKSSNT SPSEAAATTV 120 ANTAAIDDHH KRETAAHALY HALIGPQSSL PQQNLDNTII FSSAGLSSTT TLPFLHQSRN 180 LITFDPFSSS ISTTTSSSFD TNLSSISTSL QSSNVYNYAG AEDQFKATVE EPTITSIMPN 240 ILPQQPNWKA PSPSNAVDVY SNDWNWEDIE TLVSTDLNLL HWDDSSDHIH L*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008345880.2	0.0	dof zinc finger protein DOF1.4-like
TrEMBL	A0A498JTN9	0.0	A0A498JTN9_MALDO; Uncharacterized protein
STRING	XP_008371335.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5107	33	56

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	6e-30	Dof family protein

Link Out ? help Back to Top
Phytozome	MDP0000808238