PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000791364
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 309aa    MW: 34896.3 Da    PI: 4.646
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000791364genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-08184225854
                    HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    + r RR+ri ++ +eL +l+P a     +K++ ae+L+ A +Y+k L
  MDP0000791364 184 AARERRRRITDKTQELGRLIPGA-----TKMNTAEMLQAAYKYVKFL 225
                    6699******************9.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.671176225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.8E-11180234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-11181234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-8182231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-6184225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.94E-4190230No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MAMSTATFCS TDDWGSVQLL NPPEMNMLSF PSQQELQAAS SGIFGLQDYC YSLANINPDY  60
TCIDPLFQPY KSSENFFLPD FCSPTDNINL ASLSPDICPT LDEYDYSYQP YPKRQKLFHD  120
QQVQYYNSNF PIATPNYFNA YDQFLQPEIL VPTPEIRIQN PPAVAKLNNK AVSGTGTVSP  180
QSIAARERRR RITDKTQELG RLIPGATKMN TAEMLQAAYK YVKFLRAQVS VLKLMTDSPI  240
QQERKEEGLH INQESLQVVA SPIVQEKLYS EEKCLVLKEF VEVLAKDDDI QSKPLLRDKV  300
AEXLQTNG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028965117.10.0transcription factor bHLH53-like
TrEMBLA0A498IUM60.0A0A498IUM6_MALDO; Uncharacterized protein
STRINGXP_008365998.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-26bHLH family protein