PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000748952 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | BES1 | ||||||||
Protein Properties | Length: 329aa MW: 35453.9 Da PI: 7.2214 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 45.7 | 2.6e-14 | 87 | 159 | 70 | 147 |
DUF822 70 rkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvs 147 r g+kp +e+ag+ +++s +ss+q+s++ssa++spv+sy+asp+sssfpsp+++d +++ llp+l++ ++++ MDP0000748952 87 RDGCKPS-PMEIAGAPTNMSACSSIQQSPQSSAFPSPVPSYHASPSSSSFPSPTRFDGNPS----YLLPFLRNIASIP 159 889***9.*************************************************9966....5888888877665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.9E-11 | 87 | 142 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence Send to blast |
MDRDRDDDET XLHWTKNGLA MGRWLCMXKL VKDRNRARKG RSGWKAVQLD LQDEREKQNR 60 EGVVGAQSGQ YRVTTESSPG YGGGPGRDGC KPSPMEIAGA PTNMSACSSI QQSPQSSAFP 120 SPVPSYHASP SSSSFPSPTR FDGNPSYLLP FLRNIASIPT NLPPLRISNS APVTPPLSSP 180 TSRGSKRKPD WDSLTNGCIN SLRHPLFAAS APSSPTRRHH LTPATIPECD ESDASTVDSG 240 RWVSFQTGAP LVAPPSPTFN LMKPVAEQNV LQDAVEAHVG MGWASTAERG RGSDFEFESG 300 TVKAWEGERI HEVGADDLEL TLGNGKNH* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.12130 | 1e-143 | bud| cell culture| fruit| leaf| stem |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008338783.2 | 1e-174 | BES1/BZR1 homolog protein 2-like | ||||
Swissprot | Q94A43 | 5e-76 | BEH2_ARATH; BES1/BZR1 homolog protein 2 | ||||
TrEMBL | A0A498HZZ3 | 1e-173 | A0A498HZZ3_MALDO; Uncharacterized protein | ||||
STRING | XP_008338165.1 | 1e-173 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1275 | 34 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19350.3 | 3e-59 | BES1 family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000748952 |