PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000479652
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 528aa    MW: 57466.2 Da    PI: 7.3967
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000479652genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.2e-10387445563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +  +l+  +  l+se+
  MDP0000479652 387 KRAKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQFTSLQRDSVGLTSEN 445
                    9*****************************************99999998887777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.6E-17383447IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.565385448IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.4E-11387439No hitNo description
SuperFamilySSF579598.04E-11387441No hitNo description
PfamPF001703.5E-9387445IPR004827Basic-leucine zipper domain
CDDcd147032.50E-22388437No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MEGSDETGSS KQQRPNPTFG SSSFLVPKPN SNLDIPNFNP SQMGFRMSPE SSKRPGIPPS  60
HPNNHNSMPF SRSQSGSWQL GQQNFSSGSS HARSMSQPPF FSLDSLPPLS PLTYREPSAP  120
SLSDQNSVDV SMGESVVNSH GPSLRSPVNE STAYRAGDGL PPRRGHRRSN SDVPLGFSAI  180
NQPSPQLIPV RRRTSFDGSA SAKPIQLMKQ GSNGNAEGVD DRKSGGEVVD DLFNAYMNLE  240
NIDQMNLSGN EDKDIDSRAS ASKTNGGESS DNEVESGLNG NRNGAGVQRP GSGFPNERRE  300
GLKRTASGDV VSSARHCRSI SMDSYMENLN FDDEPLKPLG QQSPSTSLDG NSAKFSMEFG  360
SGEFNAIELK KIMESEKLAE IALSDPKRAK RILANRQSAA RSKERKMRYI VELEHKVQTL  420
QTEATTLSAQ FTSLQRDSVG LTSENNELKF RLQSLEQQAK LKDALNEALT GEVQRLKLAA  480
AELGGEGHLS NHTQQNTQPQ QFMQPQQNRQ PSHRQNSNAA AKPELNQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.126650.0leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008387965.10.0transcription factor RF2a-like
RefseqXP_017191988.10.0transcription factor RF2a-like
TrEMBLA0A498HRB80.0A0A498HRB8_MALDO; Uncharacterized protein
STRINGXP_008387965.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-116bZIP family protein