PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000265800
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family CAMTA
Protein Properties Length: 1424aa    MW: 159369 Da    PI: 6.0728
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000265800genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1156.74.7e-492554003117
           CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg.................... 77 
                    +e k+rwl++ ei++iL n++++elt++++ rp+ gsl L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK                       
  MDP0000265800 255 QEaKNRWLRPAEICEILRNYRHFELTTDPPVRPPAGSLYLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKGLVlrdrveslsglclpypdpls 350
                    5559*********************************************************************6657789999************* PP

           CG-1  78 ..........vevlycyYahseenptfqrrcywlLeeelekivlvhylev 117
                              v+vl+cyYah+e+n++fqrr+yw+L+++l++ivlvhy++v
  MDP0000265800 351 fggrslqagsVDVLHCYYAHGEDNANFQRRSYWMLDTHLQHIVLVHYRNV 400
                    ************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF533351.39E-2312134IPR029063S-adenosyl-L-methionine-dependent methyltransferase
Gene3DG3DSA:3.40.50.1504.4E-1918175IPR029063S-adenosyl-L-methionine-dependent methyltransferase
CDDcd024408.93E-855123No hitNo description
PfamPF082414.3E-1157136IPR013216Methyltransferase type 11
Gene3DG3DSA:3.40.50.1504.4E-19247274IPR029063S-adenosyl-L-methionine-dependent methyltransferase
PROSITE profilePS5143772.344250406IPR005559CG-1 DNA-binding domain
SMARTSM010766.7E-63253401IPR005559CG-1 DNA-binding domain
PfamPF038593.3E-26256327IPR005559CG-1 DNA-binding domain
PfamPF038591.4E-14355400IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.104.0E-8694784IPR013783Immunoglobulin-like fold
CDDcd001021.33E-5696784No hitNo description
PfamPF018336.2E-7696782IPR002909IPT domain
SuperFamilySSF812962.94E-18696783IPR014756Immunoglobulin E-set
SuperFamilySSF484038.78E-14875991IPR020683Ankyrin repeat-containing domain
CDDcd002044.07E-11879988No hitNo description
Gene3DG3DSA:1.25.40.207.2E-148871002IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.353896990IPR020683Ankyrin repeat-containing domain
SMARTSM002480.026929958IPR002110Ankyrin repeat
PROSITE profilePS500889.644929961IPR002110Ankyrin repeat
SMARTSM002481100968997IPR002110Ankyrin repeat
PROSITE profilePS500968.42511041133IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008168Molecular Functionmethyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 1424 aa     Download sequence    Send to blast
MTMGTTTTTQ AYGEPWYWDN RYANESGSFD WYQKYQSLAP LINLYVPRHP NQRNRILVVG  60
CGNSAFSEGM ADDGYEEVVS IDISSVVIQA MQTKYSNRPH LKYLQMDVRD MSAFETASFD  120
AVVDKGTLDS LLVSADNPSA SFLFVLSLLR IFIYFSVVSI FFVPSAEVIR GKMLPRCLRK  180
FGEKLSCEDK SEPPIWDLTN PVPLNDDGSS TEELLGNNPD VHYIYVCTKG LCELVMADTR  240
RYXPNQHLDL AQILQEAKNR WLRPAEICEI LRNYRHFELT TDPPVRPPAG SLYLFDRKAL  300
RYFRKDGHRW RKKKDGKTVK EAHEKLKGLV LRDRVESLSG LCLPYPDPLS FGGRSLQAGS  360
VDVLHCYYAH GEDNANFQRR SYWMLDTHLQ HIVLVHYRNV EEANSAARMV QTSFGSSPLQ  420
TSFASSPVHT SFASSPNRVE LGGQTLSKEF EDVDSRRDAG TSSVEQPMFG SFSHNASLLP  480
QQVGGFPESF RDPSSTWYGG PKFDHGXGLS AWQGMDSSMR NEHIMHGQNL FVEEPNRADF  540
ITLKLTDAKV DAHSGVKDVT CEDRLTTNID VQIVSAPSQR EDQVPKEHDF NVLHPQVQDY  600
SDPQIVVTPS NQVEENRDCR VRNEPVELKK LDSFGRWMDK EIGVDCDDSL MASDSGNYWS  660
TFDAESGDKE VSSLSHHMQL DIESLGPSLS QEQLFTISDF SPDWAYSGTE TKVLIVGSFL  720
GSKKDCAETN WGCMFGEIEV SAEILSNNAI RCQTPLHAPG RVPFYVTCRN RLACSEIREF  780
EYREKPIGIA INRLRDDELR FQIRLAKLLS LGSERKWLIC AVPDCDQCKL KSSIFSMRSN  840
SESDWETIDG ASVACESDHL SRRDVLIQNL LKDRLCEWLV CKIHEGGKGT HVLDNEGQGV  900
LHLTGALGYE WAIGPIIAAG VSPNFRDAHG RTGLHWASYF GREETVIALL RLGAAPGAVE  960
DPTSVFPGGQ TAADLASSRG HKGIAGYLAE VDLTSHLELL TMNENRMNNV TATIAAEKAK  1020
QTAEVSASDV AVDEQHFLKN PIAAVRKSAH AAALIQEAFR ARSFRQRQLT KSRTDISEVQ  1080
SQDLVARRSL KRVQKFAHYE DYLHVAAALK IQQNYRGWKG RKDYLKIRDR IVKIQVRKNY  1140
KKVLWSVGIL EKVILRWRRK GTGLRGFRVE GPTEDASSEV KKNDDYEFLS VGRKQKFAGV  1200
EKALARVKSM ARQPEAREQY MRLLSNFEKL EMADGENQAS NQNESSDEKV IDEVLRALNE  1260
DXESLIKVNI SSIDDPNSXF XNINIELEEV EQRQRDPSVS VSNPQVPPDC AHLSHGHTRS  1320
SQSGTGTENP KGVAGVAKLV AGVAGEVEAE GLVVVEDRGV DGAVEEGEDS VGARPKGSWS  1380
LPDQKWENRP KGWPRAVNLS GLQPSPLAPE CEALHFVSSS IXPI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2pxx_A2e-23111383127Uncharacterized protein MGC2408
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.70051e-175fruit| root
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028946965.10.0calmodulin-binding transcription activator 3-like isoform X1
TrEMBLA0A498I8I60.0A0A498I8I6_MALDO; Uncharacterized protein
STRINGXP_009372048.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF128892526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains