PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_493516g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | BES1 | ||||||||
Protein Properties | Length: 139aa MW: 16052 Da PI: 6.5521 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 128.1 | 1.1e-39 | 61 | 127 | 6 | 72 |
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkg 72 ++++kE+E++k+RER+RRai+++i++GLR++Gny lp+raD+n+V++AL+reAGw+v++DGttyr + MA_493516g0010 61 REREKEKERTKLRERQRRAITSRILSGLRQYGNYTLPVRADINDVIAALAREAGWTVDPDGTTYRSQ 127 6899*************************************************************54 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 6.4E-38 | 61 | 127 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence Send to blast |
MDMADQAHTV MSASAIKRDE DDQELQNQQR EQEQEQEEQG QGIAEQVLLP AGNATVKRRI 60 REREKEKERT KLRERQRRAI TSRILSGLRQ YGNYTLPVRA DINDVIAALA REAGWTVDPD 120 GTTYRSQAHV LLLYFMLKI |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF081576 | 0.0 | EF081576.1 Picea sitchensis clone WS0296_O23 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008232902.1 | 4e-30 | PREDICTED: beta-amylase 7 | ||||
Refseq | XP_010523740.1 | 4e-30 | PREDICTED: beta-amylase 7 | ||||
Swissprot | O80831 | 2e-29 | BAM7_ARATH; Beta-amylase 7 | ||||
TrEMBL | A0A4D9BKE8 | 3e-30 | A0A4D9BKE8_SALSN; Uncharacterized protein | ||||
STRING | XP_008232902.1 | 2e-29 | (Prunus mume) | ||||
STRING | XP_010523740.1 | 2e-29 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP10087 | 8 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45300.2 | 2e-22 | beta-amylase 2 |
Publications ? help Back to Top | |||
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