 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MA_158362g0010 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
bHLH |
Protein Properties |
Length: 397aa MW: 44444.8 Da PI: 6.7834 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_158362g0010 | genome | ConGenIE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 26.9 | 8.8e-09 | 229 | 275 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h+ +Er RR++i +++ L++l+P + +k Ka ++ + ++Y++ Lq
MA_158362g0010 229 HSLAERVRREKISERMKLLQDLVPGC----NKITGKAVMVDEIINYVQALQ 275
999***********************....899****************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MALEGNRNYD FDGLTNYNKV SAISAPNYET SSASWHSAIS GCALNMNHQP SLQATAEGSF 60 RPDNSSYSLD ALLPFSVQVL DNVNRRTHLQ NVKLVSEHSL QRNLFSPIRV QQPEIEQKYN 120 ASGEECSSSE QSTGGRKRRI LPNDKARFQA STFTSSSEKN TENESKSKRP KIAEAKKEND 180 DSKSDAEQGT HTGRPEVNPR QSGQSVKPPE TPKDYIHVRA RRGQATDRHS LAERVRREKI 240 SERMKLLQDL VPGCNKITGK AVMVDEIINY VQALQCQVEF LSMKLEAVNP KLDFNMEGFL 300 VKDMLEPSGM SLASNTAMAY PQFHQPEWVG MQVGMPCEME EQCMGNARQV ALRRIMNENC 360 PLIEGCGDAK ISNVWDDELQ NVVRLGVGQN STSFFHI
|
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP58 | 16 | 313 |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G26260.3 | 6e-56 | cryptochrome-interacting basic-helix-loop-helix 5 |