PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10031672
Organism
Linum usitatissimum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family Trihelix
Protein Properties Length: 995aa    MW: 109899 Da    PI: 7.8192
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10031672genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.43.8e-081902471875
     trihelix  18 eerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 
                  +++  rgk ++ + +ev++++ + g++r +k+   kw+n+ ++++k+ e+e++++ ++
  Lus10031672 190 QSTATRGKTRAEKDREVAAVLNRNGINRDAKTAGTKWDNMLGEFRKVYEWERGGERDR 247
                  566678899999****************************************985444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500119.008678986IPR000719Protein kinase domain
SuperFamilySSF561121.43E-12827983IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.102.0E-7829989No hitNo description
CDDcd001803.93E-9842983No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 995 aa     Download sequence    Send to blast
MSDHKGEPTK KQPSQQQQHS SSSSPKESPP PHLHRHPPFN ISPPPLYIPS VQFDPTTATN  60
TKRPRFSSTT SSSSQWKLLS PTHPKPPAVT GGGEHATTTT AATGSSSDTA TSSPTHSPPV  120
PSLSTNKPAA ESPADDQIQT QTHQTRKGKF VSPVWKPNEM LWLAKAWRAQ YNNNNNHSQS  180
SSSIDYDVIQ STATRGKTRA EKDREVAAVL NRNGINRDAK TAGTKWDNML GEFRKVYEWE  240
RGGERDRIGK SYFRLSPYER KLHRLPASFD EEVFDELSQF MGSRIRSAPS SRGAGLLVSS  300
TTSSGEDPKN IVSGTTITPA RSLLLPPPPF KDDDFLNLPL CSGRSSKQLV MSGGAMEPYN  360
FHGLRSINTS LLGFDSSTME PAGVGSWSMS NSKELRRIGK VRMTWEESVS LWAEEVEHHR  420
GRIKVQGSSF LNADELMFVD DSMVACTMES FEDGAGGAPL ALRGFSVDKF VPGQHIKVFG  480
RKKSKSSPST SAPLTEIRPA MATVEYQDPT EYYMSCLRAP PPTLPTLFEL SWYIQEPPPE  540
ELRFPIRKDV YKDLPPGKEL FFTTTESLLD SKSFAFHAVG PLVRSCNNVI TPSSRDSFIG  600
LWDDCVNRLI LKFCSLDLIR KSPSSFSSSS SLQDQWPNVT GFVKGLCLWR GEEVDRLTEG  660
HEFEPSSSIA EKLMWTYHDL PYVLGYYAVG HTVTFCAMCR SLSSSSSSSQ QIIRTDLYSL  720
DLSSPSDRLR ALVPCYRIAG LLTLLADRCS TKAYSDFERW FGAESNGSVL MEATPNTMTR  780
YYPSRRKWSA VKEIYDILDQ RIPHSEFIAH SSEKDLALVF KPRGLRFKPA NCEQLVESLI  840
YITKALVALH DLSFMHRDLS WEKVMLRANT TVENGSGGSG QEWFVCGFDE AVAAPALCPR  900
EGGGSGRHAP EMGRGLHGVK VDVWGVGELV RTCGLFGSGS DLSSGLGSGL GSGGVVKLLR  960
DLQNRCLDQN PEVRPTAADC YHHLSQLQSM QQQV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10031672
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007038523.20.0PREDICTED: uncharacterized protein LOC18605455 isoform X1
RefseqXP_011030014.10.0PREDICTED: uncharacterized protein LOC105129591
TrEMBLA0A061G7K80.0A0A061G7K8_THECC; Kinase superfamily protein isoform 1
STRINGLus100316720.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118572831
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.17e-06Trihelix family protein