 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lj6g3v0802160.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
Family |
WRKY |
Protein Properties |
Length: 572aa MW: 62696.5 Da PI: 7.511 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj6g3v0802160.1 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101 | 7.3e-32 | 221 | 278 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers+ d+k++ei+Y+g+H+h+k
Lj6g3v0802160.1 221 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGKITEIIYKGTHDHPK 278
8****************************************.***************85 PP
|
2 | WRKY | 106.2 | 1.6e-33 | 395 | 453 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
Lj6g3v0802160.1 395 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 453
59********************************************************7 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 572 aa
Download sequence Send
to blast |
MDAGEAHSDL RRNGDDPTRP DSRSDSATDG AAATGGARYK LMMPAKLPIS RSPCVTIPPG 60 LSPSSFLESP VLLSNMKVEP SPTTGSLPRL QQTAHGFVIS AAFPVATVCF NTNTVDNRKL 120 SFFDLKSHCR SNMVPADFED HVSDKSTQNG QVKAVKSEIA VPSNEVGRSS PVHMVSSGAS 180 THVEVNSHEL NPRGNIATGP QASQIEGGAG GLPVAADRAS DDGYNWRKYG QKLVKGSEFP 240 RSYYKCTHPN CEVKKLFERS HDGKITEIIY KGTHDHPKPP PNRRYSTGTI ISMPEERYDK 300 AYLTSRDDKG FNNYGQVSHT AEPDSTPELS PSATNDDSVE GIGFLSNRNN DEVDDDDPFL 360 KRRKMDLGNI DITPVVKPIR EPRVVVQTLS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK 420 CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPIARNS CHDHMAGQAT AQTRIRAEES 480 DTISLDLGMG ISQAAENRSN NQGRMVLSEF GDSQTHTSNS NFKFVHTAPA SVYLGVLNNN 540 NSHPYGSKEN PSDRNHSAYP CPQNMGRILM GP
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP009789 | 0.0 | AP009789.1 Lotus japonicus genomic DNA, chromosome 6, clone: LjT11E14, TM2023, complete sequence. |