 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Lj6g3v0802160.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
WRKY |
| Protein Properties |
Length: 572aa MW: 62696.5 Da PI: 7.511 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj6g3v0802160.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 101 | 7.3e-32 | 221 | 278 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers+ d+k++ei+Y+g+H+h+k
Lj6g3v0802160.1 221 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGKITEIIYKGTHDHPK 278
8****************************************.***************85 PP
|
| 2 | WRKY | 106.2 | 1.6e-33 | 395 | 453 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
Lj6g3v0802160.1 395 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 453
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 572 aa
Download sequence Send
to blast |
MDAGEAHSDL RRNGDDPTRP DSRSDSATDG AAATGGARYK LMMPAKLPIS RSPCVTIPPG 60
LSPSSFLESP VLLSNMKVEP SPTTGSLPRL QQTAHGFVIS AAFPVATVCF NTNTVDNRKL 120
SFFDLKSHCR SNMVPADFED HVSDKSTQNG QVKAVKSEIA VPSNEVGRSS PVHMVSSGAS 180
THVEVNSHEL NPRGNIATGP QASQIEGGAG GLPVAADRAS DDGYNWRKYG QKLVKGSEFP 240
RSYYKCTHPN CEVKKLFERS HDGKITEIIY KGTHDHPKPP PNRRYSTGTI ISMPEERYDK 300
AYLTSRDDKG FNNYGQVSHT AEPDSTPELS PSATNDDSVE GIGFLSNRNN DEVDDDDPFL 360
KRRKMDLGNI DITPVVKPIR EPRVVVQTLS EVDILDDGYR WRKYGQKVVR GNPNPRSYYK 420
CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPIARNS CHDHMAGQAT AQTRIRAEES 480
DTISLDLGMG ISQAAENRSN NQGRMVLSEF GDSQTHTSNS NFKFVHTAPA SVYLGVLNNN 540
NSHPYGSKEN PSDRNHSAYP CPQNMGRILM GP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP009789 | 0.0 | AP009789.1 Lotus japonicus genomic DNA, chromosome 6, clone: LjT11E14, TM2023, complete sequence. |
