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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lj5g3v0816340.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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| Family |
E2F/DP |
| Protein Properties |
Length: 470aa MW: 51362.4 Da PI: 5.0671 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj5g3v0816340.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 84 | 1.2e-26 | 149 | 214 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg
Lj5g3v0816340.1 149 RYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIHWKG 214
6899******************************...99..****************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0051446 | Biological Process | positive regulation of meiotic cell cycle |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 470 aa
Download sequence Send
to blast |
MSSTAGASDN RATPPLQPPN RPPLKRHLAF ASTKPPFAPP DDYHTFSAAA TTAAGPDSRR 60
GAHHEPEAVV VRSPFIKRKN GMNNNEGDSQ KWGNSPGGTN VMNSPFKTPV SAKGGRTHKL 120
KVSKEGRSCP PTPISNAGSP SPLTPANNRY DSSLGLLTRK FINLIKHAED GMLDLNKAAE 180
TLEVQKRRIY DITNVLEGIG LIEKKLKNRI HWKGIESSTP GAVDGDISML KAETEKLSSE 240
EQRLDDQIRE MQEKLRSLSE NENNQKCLFV TEEDIKAVPC FQNETLIAIK APHGTTLEVP 300
DPEEAVDYPQ RRYRIILRST MGPIDVYLIS QFEEKFEEIN GAEPPISLPL ASSSGSNEQL 360
VTETVPTEFS GIGLEPQAQL SSQGYSDLNA SQEFAGGMMK IVPSDADNDS DYWLLSDAEV 420
SITDMWKTDA SVDWNGVDML HPDFGLVSRP QTPSSGFAEA PPTAANSNQR
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed in a cell cycle-dependent manner. Most abundant in early S phase. Decreased expression during the passage into G2. {ECO:0000269|PubMed:11108847, ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543}. |
| Uniprot | TISSUE SPECIFICITY: Highly expressed in the shoot apical meristem, emerging leaf primordia, and vascular tissues of young leaf primordia. Expressed in flowers, in epidermis and cortex of hypocotyls, and at lower levels in leaves. {ECO:0000269|PubMed:11108847, ECO:0000269|PubMed:11889041}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Regulates gene expression both positively and negatively. Activates the expression of E2FB. Involved in the control of cell-cycle progression from G1 to S phase. Stimulates cell proliferation and delays differentiation. {ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11862494, ECO:0000269|PubMed:11889041, ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:12913157, ECO:0000269|PubMed:15377755, ECO:0000269|PubMed:16514015, ECO:0000269|PubMed:19662336}. |
