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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lj2g3v2088190.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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| Family |
ERF |
| Protein Properties |
Length: 330aa MW: 36680.9 Da PI: 9.1804 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj2g3v2088190.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.9 | 6e-19 | 130 | 180 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge
Lj2g3v2088190.1 130 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 180
59******9.**********954...5**************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010200 | Biological Process | response to chitin |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MEGKRGNFNN TQHELRDSAN IGSSLSNLIL SSSSTNTLDS IFSDCPTTNN TASAATTNSV 60
MDYFEPFGVS SFEPLGSSVY LRQRDILQKF YQESRLNGSP VPTSFANPSL NAAPYTSSFT 120
SLLNPAKKKL YRGVRQRHWG KWVAEIRLPQ NRMRVWLGTY DTAEAAAYAY DRAAYKLRGE 180
YARLNFPNLK DPSKLGFGDS TRLNALKSSV DAKIQAICQK VKREKAKKNA AKKLNDTKRE 240
KQREEESQKK VDSASSSSSS LPPLSPSNFY DSWVNELFSP SVSEDGIWKG ENSPSSVSTA 300
MVTEETEFGG CSLERLPSFD PELIWEVLAV
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP010317 | 0.0 | AP010317.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjT47B15, TM0635, complete sequence. |
| GenBank | KC787974 | 0.0 | KC787974.1 Lotus corniculatus AP2/ERF (ERF035) mRNA, complete cds. |
