 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Lj2g3v1277260.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
WRKY |
| Protein Properties |
Length: 447aa MW: 48986.8 Da PI: 7.3841 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj2g3v1277260.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 105.7 | 2.4e-33 | 169 | 225 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++v+ i+Y+geHnh+
Lj2g3v1277260.1 169 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCPVKKKVERSL-DGHVTAIIYKGEHNHQ 225
8****************************************.***************8 PP
|
| 2 | WRKY | 107.8 | 5.5e-34 | 337 | 395 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++dpk+v++tYeg+Hnh+
Lj2g3v1277260.1 337 LDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHD 395
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 447 aa
Download sequence Send
to blast |
MNGDRPPWKE EAASGGRGPP PRPTITLPPR TDTLFSGGFS PGPMTLLSNL LADGDDCKSF 60
SQLLAGAMAS PAAAAHGGFS PGLFSPQVSF EMSHQQALAQ VSAQGSSNMH LQPENSLSRS 120
ALHTSNTTQH HLVPPSGEES HAAKTEPTDY SLSEQRFQSS SLNVDKPADD GYNWRKYGQK 180
HVKGSEFPRS YYKCTHPNCP VKKKVERSLD GHVTAIIYKG EHNHQRPHPN KRAKDAVISN 240
DNSNMQGNVD LTTYQGMSTN AMSKMDQESS QATAEHVSGT SDSEEVGDHE TEVDEKNVEP 300
EPKRRNTEVI PSEPASSHRT VTENRIIVQT TSEVDLLDDG YRWRKYGQKV VKGNPYPRSY 360
YKCTTPGCNV RKHVERASTD PKAVITTYEG KHNHDVPAAK TNSHTIANNS ASQLRSQNNN 420
HGFGNSGIGG NEQQPVARLR LKEEQIT
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Has a positive role in resistance to necrotrophic pathogens (e.g. Botrytis cinerea), but a negative effect on plant resistance to biotrophic pathogens (e.g. Pseudomonas syringae). {ECO:0000269|PubMed:18570649, ECO:0000269|PubMed:22219184}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By biotic and abiotic stresses such as pathogen infection (e.g. Botrytis cinerea and Pseudomonas syringae), salicylic acid (SA), jasmonic acid (JA), ethylene (ACC), liquid infiltration or spraying, and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:18570649}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP010496 | 0.0 | AP010496.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjB15B24, BM1861, complete sequence. |
