 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj1g3v4830200.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
WRKY |
| Protein Properties |
Length: 362aa MW: 40889.2 Da PI: 7.281 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj1g3v4830200.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.3 | 2.1e-30 | 300 | 358 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ kg+++pr+YYrCt+ gCpv+k+v+r+aed +v+++tYeg+Hnh+
Lj1g3v4830200.1 300 SDGCQWRKYGQKMAKGNPCPRAYYRCTMGsGCPVRKQVQRCAEDRTVLITTYEGNHNHP 358
7***************************98****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MEENRHHQRR EFSFLSSGGD FHRHNLNLDC STNNTDPPTP PPFKEMDFFK IHPHNSNKDA 60
AAAADDDHHQ QQQQQQYDQD QRDTHLTITK HESPSLVTHH PVNTGLNLTC SSSANNGEEN 120
TETELSRVES ELRRVQEENH KLRIVLDQIT KSYNQLQAHL HFIVLHKQNP HHQNIEINGM 180
IAGQKYVDPG PCTKLDVKID ASINSDDKSD REASISPSNN KEVMSNKRDH HHLTTKPADL 240
GKQQACPGPT GDVLDRSSSQ SLGSPKLEES KTAEHVAGDQ FHLRKARVSV RARSEAPMIS 300
DGCQWRKYGQ KMAKGNPCPR AYYRCTMGSG CPVRKQVQRC AEDRTVLITT YEGNHNHPLP 360
PP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP004967 | 0.0 | AP004967.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT27L02, TM0144, complete sequence. |
