PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Lj0g3v0275009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 144aa MW: 16683.8 Da PI: 7.0446 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.1 | 2.9e-11 | 59 | 106 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 ++ rr+q+NRe+ArrsR RKk +e+L++ L eN++Lk ++l+ + Lj0g3v0275009.1 59 RKIRRMQSNRESARRSRWRKKRHLENLTNQLNRLRIENRELK---NRLTST 106 789***************************************...555554 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.1E-10 | 55 | 119 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.266 | 57 | 103 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-8 | 58 | 104 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.58E-11 | 59 | 112 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-8 | 59 | 105 | No hit | No description |
CDD | cd14702 | 1.59E-14 | 60 | 110 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 62 | 77 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 144 aa Download sequence Send to blast |
MLFQDEEAVQ FSCPMVHEAM FTSSEIEELF SLINQPDDPS SPGSGSQGSN RAVYSAQERK 60 IRRMQSNRES ARRSRWRKKR HLENLTNQLN RLRIENRELK NRLTSTVHHH LLLSVENECL 120 ISESMTLMAE LSDPCQISST MFSQ |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Lj0g3v0275009.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_014632411.1 | 3e-65 | basic leucine zipper 4 | ||||
Refseq | XP_028234281.1 | 3e-65 | basic leucine zipper 4-like | ||||
TrEMBL | A0A1J7IS28 | 2e-64 | A0A1J7IS28_LUPAN; Uncharacterized protein | ||||
STRING | GLYMA06G05111.1 | 1e-64 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22850.2 | 3e-14 | basic leucine-zipper 6 |