PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj0g3v0205019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | G2-like | ||||||||
Protein Properties | Length: 186aa MW: 21511.1 Da PI: 7.742 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 93.5 | 1.7e-29 | 20 | 75 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmk.vkgLtlehvkSHLQkYRl 55 +prlrWt +LHe+Fveave+LGG++kAtPk+il+lm+ vkgL ++h+kSHLQ+YR Lj0g3v0205019.1 20 QPRLRWTLDLHEHFVEAVESLGGKQKATPKRILQLMNnVKGLRISHIKSHLQMYRN 75 59**********************************549****************5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.3E-27 | 17 | 75 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.33E-13 | 19 | 75 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.2E-21 | 21 | 75 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.3E-8 | 22 | 74 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MKNCSTRNGG DTRKYHKSEQ PRLRWTLDLH EHFVEAVESL GGKQKATPKR ILQLMNNVKG 60 LRISHIKSHL QMYRNVKGRR HTMYELQKEN AQVSDLPICS RSSLRTKLSV SKYETDYDLN 120 QEPESSACLL SDISNDEEES SRTMKFLDER MMHSDHERMH TEDNHVVDSS SVQTHGSNSI 180 NLDLAI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 4e-16 | 20 | 79 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 4e-16 | 20 | 79 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 4e-16 | 20 | 79 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 4e-16 | 20 | 79 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 4e-16 | 20 | 79 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 4e-16 | 20 | 79 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 4e-16 | 20 | 79 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 4e-16 | 20 | 79 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj0g3v0205019.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028247156.1 | 2e-62 | probable transcription factor KAN4 | ||||
TrEMBL | A0A371H3E9 | 6e-65 | A0A371H3E9_MUCPR; Putative Myb family transcription factor (Fragment) | ||||
STRING | GLYMA08G41735.1 | 6e-62 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9186 | 28 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 2e-25 | G2-like family protein |