PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | LPERR02G27610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family | bZIP | ||||||||
Protein Properties | Length: 288aa MW: 31294.8 Da PI: 10.4189 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.6 | 3.7e-15 | 208 | 256 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k+ ee+ LPERR02G27610.1 208 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNEDLQKKQEEML 256 79***************************************97766543 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.8E-13 | 204 | 269 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.254 | 206 | 258 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.53E-10 | 208 | 258 | No hit | No description |
CDD | cd14707 | 4.25E-24 | 208 | 260 | No hit | No description |
Pfam | PF00170 | 1.2E-13 | 208 | 258 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.4E-14 | 208 | 259 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 211 | 226 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0010255 | Biological Process | glucose mediated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence Send to blast |
MDFPGGSGRQ QQQPQQQQLP PMTPLPLARQ GSVYSLTFDE FQTTLGGVGK DFGSMNMDEL 60 LRSIWTAEES HAVGEPAAVQ RQGSLTLPRT LSQKTDMSVP PAPAPAAVPP PPPPPPPPQQ 120 QPPSVLFGES NVFAPIVPPL SLGNGLVTGG RGGGAAPLLS PVRPVSSNGF GKMEGGDLSS 180 LSPSPVPYVF NGGLRGRKAP GIEKVVERRQ RRMIKNRESA ARSRQRKQAY MMELEAEVAK 240 LKELNEDLQK KQEEMLEQQK NEALERITRQ VGPTTKRICL RRTLTGPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00186 | DAP | Transfer from AT1G45249 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | LPERR02G27610.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP779638 | 1e-155 | KP779638.1 Oryza nivara OsbZIP23 (bZIP23) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015688745.1 | 1e-136 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
Swissprot | Q6Z312 | 4e-92 | BZP23_ORYSJ; bZIP transcription factor 23 | ||||
TrEMBL | A0A0D9VLF8 | 0.0 | A0A0D9VLF8_9ORYZ; Uncharacterized protein | ||||
STRING | LPERR02G27610.1 | 0.0 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.2 | 2e-26 | ABRE binding factor 4 |