PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0726s0010.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRF
Protein Properties Length: 289aa    MW: 32651.5 Da    PI: 10.3619
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0726s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.11.7e-24209253145
                  WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                          d+epgrC+RtDGKkWRC +++++ +k+CE+Hlhrgr+rsrk +++
  Kalax.0726s0010.1.p 209 DPEPGRCKRTDGKKWRCAKEAMPEYKYCEKHLHRGRHRSRKLVDP 253
                          79***************************************9987 PP

2QLQ36.51.5e-13143177337
                  QLQ   3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                          FT +Q q+L++Q+ +++y+ a+++vP  Ll +i+k
  Kalax.0726s0010.1.p 143 FTFMQRQELEQQACIFRYIEAGAQVPYPLLYPIWK 177
                          9********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5166617.026142177IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088806.3E-9143176IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.773209253IPR014977WRC domain
PfamPF088793.5E-20210251IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MAVSPRESGE ERETEMGPAQ GVTLEGPAKR QRQLKSLLYP IKTNKSELRN RVFRAFHQFP  60
RTHTLIQISP PRISKKMVDS ATQVSRLPDG AETGIDLGLE LGLGSNFEAE MRKYKERVVV  120
VLDNEEDDDD RRRKKRVRVP MGFTFMQRQE LEQQACIFRY IEAGAQVPYP LLYPIWKSVA  180
GSADRCRLPF IPNLFAGPVG LSWKQGRSDP EPGRCKRTDG KKWRCAKEAM PEYKYCEKHL  240
HRGRHRSRKL VDPSSATGLP PPPPSQTKAP HFPAPERIGL SIALPSGQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130135RRRKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGVIT_02s0025g04910.t011e-36(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.11e-29growth-regulating factor 2