PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV56525.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB_related
Protein Properties Length: 314aa    MW: 35479.5 Da    PI: 5.6768
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV56525.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding316e-1070112347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T++E+e  +++++  G++ W+ Ia+ ++ gRt+ ++k  w++ 
       KZV56525.1  70 NFTPQEEEFVIKLHAAIGSR-WAIIAQQLP-GRTETDVKILWNTN 112
                      89******************.*********.********988875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500905.413561IPR017877Myb-like domain
SuperFamilySSF466893.2E-1154121IPR009057Homeodomain-like
PROSITE profilePS5129414.28963117IPR017930Myb domain
SMARTSM007176.2E-867115IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.4E-1468117IPR009057Homeodomain-like
CDDcd001674.46E-670113No hitNo description
PfamPF002492.7E-970112IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MVKTELPMKR SLWNDEDEEN SGSFVRKNQK QEAGNWASFS KRSGLRRSSG KISRQRWSNE  60
EKGADPRDSN FTPQEEEFVI KLHAAIGSRW AIIAQQLPGR TETDVKILWN TNLRKKLSAM  120
GIDPVTHKPF SQILADYGNI GAFPKDRSQV AHLALDSTKN QFILKQEQPQ RHQKATFDLC  180
SQLHAINMVT YTSNYTNTTN CNMAQTFSAD RCVSSSEISS SLDRELSSFC WRDFLLEDEL  240
LTSNVKGDQE TLGILEQKCD AVVDYGGNGM ALINNGFEAS SSSSNGSFVE AMIEHQDEIR  300
FSQFPGFHEE QFNL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00148DAPTransfer from AT1G18960Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV56525.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071760.13e-93transcription factor MYB35-like isoform X2
TrEMBLA0A2Z7DFY90.0A0A2Z7DFY9_9LAMI; Uncharacterized protein
STRINGMigut.I00107.1.p2e-65(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA123481922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18960.12e-27MYB_related family protein