PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV52969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | NAC | ||||||||
Protein Properties | Length: 233aa MW: 27951.8 Da PI: 9.6206 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100.5 | 2.3e-31 | 23 | 142 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 pGfrF+P+d+ l+++yLkk ++ + ++ + i+++++y + P++L + ++e+ wyfF++rd+k r r+ ++gyWk g+++++++ ++ KZV52969.1 23 RPGFRFEPEDHMLINDYLKKFINFQLTRY-SNIPTINVYMFTPRNLSeAYPCQGEDVWYFFTPRDRK-----RLYRVCANGYWKCYGTKQQIYH-DNVR 114 79*********************999888.77**************83444456779********97.....789*99****************.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyr 127 +g k++L+fy+g+ p+g++t Wvm+ey KZV52969.1 115 IGYKNSLIFYEGEPPNGRETIWVMKEYI 142 ***************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.09E-38 | 19 | 169 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 38.015 | 22 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.6E-18 | 24 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
MYPTLQRIAS GPDEGEYTRV HLRPGFRFEP EDHMLINDYL KKFINFQLTR YSNIPTINVY 60 MFTPRNLSEA YPCQGEDVWY FFTPRDRKRL YRVCANGYWK CYGTKQQIYH DNVRIGYKNS 120 LIFYEGEPPN GRETIWVMKE YIADPPSRLR DDETGEIMDD YVLCRIHMRP RCRLPPRNAY 180 KQLLSSFAKL STTGRTYKSA GHKRRKTEQQ RQYNTLAPHS EIKSADFWKL KEW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-28 | 18 | 169 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-28 | 18 | 169 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-28 | 18 | 169 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-28 | 18 | 169 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 8e-28 | 18 | 169 | 16 | 168 | NAC domain-containing protein 19 |
3swm_B | 8e-28 | 18 | 169 | 16 | 168 | NAC domain-containing protein 19 |
3swm_C | 8e-28 | 18 | 169 | 16 | 168 | NAC domain-containing protein 19 |
3swm_D | 8e-28 | 18 | 169 | 16 | 168 | NAC domain-containing protein 19 |
3swp_A | 8e-28 | 18 | 169 | 16 | 168 | NAC domain-containing protein 19 |
3swp_B | 8e-28 | 18 | 169 | 16 | 168 | NAC domain-containing protein 19 |
3swp_C | 8e-28 | 18 | 169 | 16 | 168 | NAC domain-containing protein 19 |
3swp_D | 8e-28 | 18 | 169 | 16 | 168 | NAC domain-containing protein 19 |
4dul_A | 7e-28 | 18 | 169 | 13 | 165 | NAC domain-containing protein 19 |
4dul_B | 7e-28 | 18 | 169 | 13 | 165 | NAC domain-containing protein 19 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV52969.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2Z7D3R2 | 1e-176 | A0A2Z7D3R2_9LAMI; NAC domain-containing protein 2-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA746 | 24 | 103 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 2e-32 | NAC domain containing protein 47 |