PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV41040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 778aa MW: 85770.8 Da PI: 6.3346 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.5 | 1.5e-20 | 96 | 151 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+ q++eLe++F++n++p++++r eL ++lgL+ rqVk+WFqNrR++ k KZV41040.1 96 RKKYHRHTPFQIQELEACFKENPHPDEKSRLELGRRLGLDVRQVKFWFQNRRTQIK 151 7999************************************************9987 PP | |||||||
2 | START | 151.5 | 7.5e-48 | 302 | 524 | 2 | 205 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 la++a++el+k+ ++++p W++s e +n+ e++++f++ + + +ea r +g v ++++ +e++ld++ +W+e+++ +a+t++vi s KZV41040.1 302 LALAAMNELIKLSQLDSPIWFQSLegggETLNQVEYRKTFSPCTGvsssnFATEATRYTGTVMLDCETIMETFLDVN-RWTEMFPwiigSASTHDVIFS 399 6899************************************99877999999**************************.********************* PP T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS START 88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179 g g+l lm ae+q+lsplvp R f+R+++q++++ w++vdvS+d ++p+ +v +++lpSg + ++ ng skvtw+eh++ +++ +h+ KZV41040.1 400 GsggkrnGVLLLMEAEFQLLSPLVPiRQAKFLRFCKQHKEDIWAVVDVSTDTIFQNPSVNASVSCKRLPSGTTFVDMFNGSSKVTWIEHMEFDESAIHE 498 ***************************************************99988887888999********************************** PP HHHHHHHHHHHHHHHHHHHHTXXXXX CS START 180 llrslvksglaegaktwvatlqrqce 205 ++++l++sg+ +ga++w + l+rqce KZV41040.1 499 IYKPLLRSGIGFGAQKWISILKRQCE 524 *************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.7E-21 | 82 | 147 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.92E-20 | 84 | 153 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.637 | 93 | 153 | IPR001356 | Homeobox domain |
SMART | SM00389 | 3.0E-19 | 95 | 157 | IPR001356 | Homeobox domain |
CDD | cd00086 | 4.36E-19 | 96 | 153 | No hit | No description |
Pfam | PF00046 | 4.0E-18 | 96 | 151 | IPR001356 | Homeobox domain |
PROSITE profile | PS50848 | 34.38 | 292 | 528 | IPR002913 | START domain |
SuperFamily | SSF55961 | 1.51E-25 | 293 | 524 | No hit | No description |
CDD | cd08875 | 2.72E-95 | 296 | 524 | No hit | No description |
SMART | SM00234 | 9.5E-29 | 301 | 525 | IPR002913 | START domain |
Pfam | PF01852 | 3.0E-40 | 302 | 524 | IPR002913 | START domain |
SuperFamily | SSF55961 | 1.37E-12 | 550 | 769 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0008289 | Molecular Function | lipid binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 778 aa Download sequence Send to blast |
MVADGLFNPR PDNNMSYPLQ MVHSSSPQLI FNSSPLSLAL QPKRENTGEM GFIGKGFDNN 60 VMGKTREDEA GSPASDNFEA ASGDDHETLE SKSSKRKKYH RHTPFQIQEL EACFKENPHP 120 DEKSRLELGR RLGLDVRQVK FWFQNRRTQI KTQLERHENS ILKQENDKLR IENITMKEAM 180 RSPMCNNCGS PAILGEVPIE HHHLMIENAR LKDELNRLGV LANKFLGTPA GSMHPVMGNS 240 RLDLGVVRDG LCTLNYSESP LPLGLDFGDR GSSTFPMGPP SGLTMGISSV DVPVNKSVFL 300 DLALAAMNEL IKLSQLDSPI WFQSLEGGGE TLNQVEYRKT FSPCTGVSSS NFATEATRYT 360 GTVMLDCETI METFLDVNRW TEMFPWIIGS ASTHDVIFSG SGGKRNGVLL LMEAEFQLLS 420 PLVPIRQAKF LRFCKQHKED IWAVVDVSTD TIFQNPSVNA SVSCKRLPSG TTFVDMFNGS 480 SKVTWIEHME FDESAIHEIY KPLLRSGIGF GAQKWISILK RQCELVATIT SSTVPTETLT 540 LTGKKSLAKL AQRMTRNFCT GVCSTVHKWE MLQNEISSND TKLAMRQSFG DLGEPSGVIL 600 SATTTVWMPV SPIRLFDFLQ DEKARVHWDV LSQDGPIQQI LYLPKSQDPG NGISILRGNA 660 PPTNRNGVLI FQDTFFDSSG SLIVHAAVDI TGINMVLSGG DSTSLSFLPS GFAILPDCFS 720 DSSKPPGAND CGGSFLTLGF QILVNNLPAA KLTMESIDTV KSLIARTLHG IKTGLDCN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV41040.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076208.1 | 0.0 | homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
Swissprot | Q9M2E8 | 0.0 | HDG1_ARATH; Homeobox-leucine zipper protein HDG1 | ||||
TrEMBL | A0A2Z7C8P2 | 0.0 | A0A2Z7C8P2_9LAMI; Homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
STRING | XP_009606532.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1626 | 24 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61150.1 | 0.0 | homeodomain GLABROUS 1 |
Publications ? help Back to Top | |||
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