PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV28281.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 269aa    MW: 29131.9 Da    PI: 4.8417
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV28281.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.51.8e-3071128359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp+++ itY+++Hnh+
  KZV28281.1  71 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSSHDPTTILITYSSDHNHT 128
                 99************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.8E-3162128IPR003657WRKY domain
PROSITE profilePS5081130.97464130IPR003657WRKY domain
SuperFamilySSF1182907.98E-2665129IPR003657WRKY domain
SMARTSM007741.4E-3469129IPR003657WRKY domain
PfamPF031062.1E-2571127IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MEECYDHESE EDFSTKTPEN PGASPPSGDE EAYIPSPRRS GRGARKRVVT VPISGGGDGH  60
RSKGEVYPPP DSWSWRKYGQ KPIKGSPYPR GYYRCSSSKG CPARKQVERS SHDPTTILIT  120
YSSDHNHTVS ASKNNRQNSA AKAEVASGAT TFNSPSSSTA TTTPINFPPE ENTAANSSTR  180
LDIELSDDGY YSELAGELGW LSEMGSTIMD GTTLVGPICA GHPEMEAFMP IGEEDELLFG  240
DLGDLPEYSL VFGRVHTAEH RITCYNVAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-18711271671WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV28281.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837543.12e-95PREDICTED: probable WRKY transcription factor 69
TrEMBLA0A2Z7B1T20.0A0A2Z7B1T2_9LAMI; Putative WRKY transcription factor 69-like
STRINGMigut.M00241.1.p6e-95(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74682232
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.11e-48WRKY DNA-binding protein 69