PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26975.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GRF
Protein Properties Length: 323aa    MW: 35825.8 Da    PI: 8.4439
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26975.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC68.21.1e-2188126139
         WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrs 39 
                 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hr++s s
  KZV26975.1  88 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRSSSSS 126
                 79*********************************8876 PP
2QLQ67.72.6e-232762237
         QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                +FTa+Q+q+L++Q+++yKyL+a++P+Pp+L+++i++
  KZV26975.1 27 PFTAMQWQELEHQAMIYKYLVAGLPIPPDLVMPIRR 62
                9*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009513.5E-122662IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166624.9752762IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088807.6E-182761IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166722.8788134IPR014977WRC domain
PfamPF088797.1E-1889126IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MSGTTSTSTA VRVGGGAELG YGGYRPPFTA MQWQELEHQA MIYKYLVAGL PIPPDLVMPI  60
RRSFESISAS LFHHPSLGYC SYYGKKFDPE PGRCRRTDGK KWRCSKDAHP DSKYCERHMH  120
RSSSSSFQNR PFYSAVNSNE SSLGSNLTKL QMESMPYGIN NKEFRYIHGL NPDSSDNSFS  180
AEASGSVGNL GLGPSSGCSN WQFIPSQVSS NPYLKQKPDS PFMGESSSQQ NMLRGFEPIG  240
STMPKQLPKD SFFGNESSSA GPVQHEQLPV HPFFNEWPTT KESWPNFSDD VSSKNFFSST  300
QLSISIPRAS RDVSPRSDYS PKG
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV26975.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020553030.11e-153growth-regulating factor 4-like isoform X1
RefseqXP_020553031.11e-153growth-regulating factor 4-like isoform X1
RefseqXP_020553032.11e-153growth-regulating factor 4-like isoform X1
RefseqXP_020553033.11e-153growth-regulating factor 4-like isoform X1
RefseqXP_020553034.11e-153growth-regulating factor 4-like isoform X1
TrEMBLA0A2Z7AYR20.0A0A2Z7AYR2_9LAMI; Growth-regulating factor 4-like
STRINGXP_009605688.11e-127(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7432384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.11e-43growth-regulating factor 5