PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV24681.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 321aa    MW: 36651 Da    PI: 6.7213
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV24681.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like84.79.4e-272071155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                kprl+Wt+eLH+rF++av++LG   +AtPk++ ++m+++gLtl+h+kSHLQkYRl
  KZV24681.1 20 KPRLKWTQELHQRFIDAVNELG---EATPKSLTRVMGIHGLTLYHLKSHLQKYRL 71
                79*******************4...79***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.1381774IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-251874IPR009057Homeodomain-like
SuperFamilySSF466892.51E-131972IPR009057Homeodomain-like
TIGRFAMsTIGR015576.5E-202072IPR006447Myb domain, plants
PfamPF002493.5E-92270IPR001005SANT/Myb domain
PfamPF143792.0E-21115160IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MSLQKDQTKE MNLVLSSDAK PRLKWTQELH QRFIDAVNEL GEATPKSLTR VMGIHGLTLY  60
HLKSHLQKYR LGRSQQLQNC HQIEQEDYHE TQRDDHLITG MICDGGNQQT NENLQIPETL  120
QLQMELQRKL HEQIEVQRHL QLRIEAQGKY LQKVLKKAQE ALAGYSCCSI EVEHAKAQLS  180
ELVSMVEHSG SQSSSISFLT QSQGLDNPRN ANRKRLVHNR SSLESSVTSS DISERMEETH  240
FKVEDGETNQ GKTSSIELSL MEMHPTDKNR STNERNSKKR SRINSDEHHL LIDLNYKSLN  300
TFDTGPEAID LNCKGGGTLN E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-151973158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-151973158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-152073157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-152073157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-152073157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-152073157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-151973158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-151973158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-151973158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-151973158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-151973158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-151973158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV24681.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075513.11e-113myb family transcription factor PHL8-like
TrEMBLA0A2Z7ARY10.0A0A2Z7ARY1_9LAMI; Uncharacterized protein
STRINGMigut.E00086.1.p7e-99(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60361932
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.11e-60G2-like family protein