PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ52279.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family CO-like
Protein Properties Length: 381aa    MW: 40975.6 Da    PI: 4.6399
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ52279.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.71e-07231535
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHk 35
                 C  +  k ++ +C +++ llC+dC + +H 
  KXZ52279.1  2 ACVVCAAK-ATVYCDNDKALLCKDCDTRIHM 31
                699***99.*******************994 PP
2CCT65.51.5e-22314358145
         CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 
                 Re+++ RY+eKrk+RkFeK+irY+sRKa+Ae RpR+KGrF+k++e
  KXZ52279.1 314 REQRVARYREKRKNRKFEKTIRYASRKAYAEIRPRIKGRFAKKEE 358
                 9*****************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF006437.8E-6231IPR000315B-box-type zinc finger
CDDcd000219.15E-4344No hitNo description
PROSITE profilePS501198.5744083IPR000315B-box-type zinc finger
PROSITE profilePS5101716.311314356IPR010402CCT domain
PfamPF062031.9E-17314356IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0009909Biological Processregulation of flower development
GO:0010018Biological Processfar-red light signaling pathway
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MACVVCAAKA TVYCDNDKAL LCKDCDTRIH MSNAVAARHV RRVPCEGGCR GGASLFCRCD  60
NAYMCDGCHS SNPLASSHKV EPVAPLPALE EEFALLEHGA FAADPCESVA QSAASPGLAW  120
FVDDEKATFP EPAVLSPTGS EAAVVPVVSP PLDDLAFSAP ATFKDIKDKL EFEPFELDNG  180
WLEMGFDFTD ILSDTPSDVG LVPTFDGEAA EAIADAMVPT FPEELPIAEV PSQVEVGRKR  240
LAEANDDELP AKVPSLAPEL SQPSQALFSM VPPAHMLFPM IPPAPVQPPA PAPAPKSNAA  300
SYQAALAAGA NLTREQRVAR YREKRKNRKF EKTIRYASRK AYAEIRPRIK GRFAKKEEIE  360
AWKAAHGGED AVVPEVLDGD F
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002945772.10.0B-box zinc finger protein
TrEMBLA0A150GR150.0A0A150GR15_GONPE; Uncharacterized protein
STRINGXP_002945772.11e-180(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP6111112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24790.15e-18CONSTANS-like 3