PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN45766.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 291aa    MW: 32281.7 Da    PI: 10.0081
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN45766.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY642.5e-203471659
                TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY 16 kgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hnh+
  KHN45766.1  3 KGNPCPRAYYRCTASpSCPVRKQVQRCAEDMSILITTYEGTHNHP 47
                89***********999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081121.471149IPR003657WRKY domain
SuperFamilySSF1182901.57E-16349IPR003657WRKY domain
PfamPF031061.1E-16347IPR003657WRKY domain
SMARTSM007741.4E-16348IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-19349IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MGKGNPCPRA YYRCTASPSC PVRKQVQRCA EDMSILITTY EGTHNHPLPM SAIAMACKTS  60
ATASMLQSPS LSSQHGLVDS AISSIINSSA RYYNPNNALN FSTHQVSRPQ QFYFPNSSIS  120
TLNSHPTITL DLTTPPTSSS NSSFTCMPKY SSTNLNFSSG FSPLHSSMPQ SPWNSWSDEV  180
EEVRSMSKKG ASMEEGVGLQ CQRAEVNVKE RSKQKGLGFT ARRKLVERSR VHSKEKASIK  240
VRTAASMLVF GKLCVVARVV RAFDDLVFDV HGEKMDRRWP RVFGNFMDMR T
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-133492974WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN45766.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2354287e-47AC235428.1 Glycine max strain Williams 82 clone GM_WBb0142L11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014617466.11e-101probable WRKY transcription factor 61
RefseqXP_028230555.11e-101probable WRKY transcription factor 61
TrEMBLA0A0B2SGD80.0A0A0B2SGD8_GLYSO; Putative WRKY transcription factor 42
STRINGGLYMA14G12290.21e-114(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-32WRKY DNA-binding protein 9
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]