PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN37272.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 332aa MW: 37142.8 Da PI: 8.9785 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.2 | 9.5e-10 | 45 | 87 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 + k rr+++NReAAr+sR+RKka++++Le +L++ ++L KHN37272.1 45 DQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 87 56889*************************9777777666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.3E-8 | 39 | 90 | No hit | No description |
Pfam | PF07716 | 6.6E-7 | 43 | 89 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 2.6E-7 | 43 | 106 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.393 | 45 | 89 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.25E-7 | 47 | 90 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 50 | 65 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.1E-32 | 129 | 204 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence Send to blast |
MADASPRTDI STDVDTDDKN PRFDRSQSLV AVASDSSDRS KDKSDQKSLR RLAQNREAAR 60 KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISNS GDQAHSMSGN GAMAFDVEYA 120 RWLEEQNRQI NELRAGVNSH AGDTELRMII DGIMAHYDEI FRLKADAAKA DVFHLLSGMW 180 KTPAERCFLW LGGFRSSELL KLLVNQLEPL TEQQLVGITN LQQSSQQAED ALSQGMEALQ 240 QSLSETLSTG SLGSSGSSGN VANYMGQMAM AMGKLGTLEG FIKQADNLRQ QTLHQIHRIL 300 TTRQSARALL AIHDYFSRLR ALSSLWLARP RD |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN37272.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT093315 | 0.0 | BT093315.1 Soybean clone JCVI-FLGm-24E7 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001242879.2 | 0.0 | bZIP transcription factor family protein | ||||
Refseq | XP_006605392.1 | 0.0 | bZIP transcription factor family protein isoform X2 | ||||
Refseq | XP_006605393.1 | 0.0 | bZIP transcription factor family protein isoform X2 | ||||
Refseq | XP_006605394.1 | 0.0 | bZIP transcription factor family protein isoform X3 | ||||
Refseq | XP_014627739.1 | 0.0 | bZIP transcription factor family protein isoform X1 | ||||
Refseq | XP_014627740.1 | 0.0 | bZIP transcription factor family protein isoform X1 | ||||
Refseq | XP_014627741.1 | 0.0 | bZIP transcription factor family protein isoform X2 | ||||
Refseq | XP_014627742.1 | 0.0 | bZIP transcription factor family protein isoform X3 | ||||
Refseq | XP_014627743.1 | 0.0 | bZIP transcription factor family protein isoform X3 | ||||
Refseq | XP_014627744.1 | 0.0 | bZIP transcription factor family protein isoform X3 | ||||
Refseq | XP_028222401.1 | 0.0 | transcription factor TGA2-like isoform X1 | ||||
Refseq | XP_028222402.1 | 0.0 | transcription factor TGA2-like isoform X1 | ||||
Refseq | XP_028222403.1 | 0.0 | transcription factor TGA2-like isoform X2 | ||||
Refseq | XP_028222404.1 | 0.0 | transcription factor TGA2-like isoform X3 | ||||
Refseq | XP_028222405.1 | 0.0 | transcription factor TGA2-like isoform X3 | ||||
Refseq | XP_028222406.1 | 0.0 | transcription factor TGA2-like isoform X3 | ||||
Refseq | XP_028222407.1 | 0.0 | transcription factor TGA2-like isoform X3 | ||||
Swissprot | Q41558 | 0.0 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | K7LM73 | 0.0 | K7LM73_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA10G44270.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1470 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 1e-145 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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