PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN32602.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Trihelix
Protein Properties Length: 384aa    MW: 43845.9 Da    PI: 4.3401
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN32602.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.81.4e-13154238286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 Wt++e+ +L++a  ++  + +r++l+   W++++k + +  ++er+ +qC+++++ l+k+ykk+k+   +  ++   +++yf++++
  KHN32602.1 154 WTERETFVLLDAWGDRFLQHGRKSLRCEEWQQIAKMVsQVSKIERTDTQCRNRLDTLKKKYKKEKAKFPDS-DGGACKWVYFKSMD 238
                 *************************************555789**************************95.78888********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.9E-5113122IPR009057Homeodomain-like
PfamPF138372.6E-20153240No hitNo description
PROSITE profilePS500906.202154211IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.9E-5179218IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MDGIEDDARY PPNPYGYGYQ NSLYSPPVDT EYALDDNDEN EEHVQLEGED EVDVDQSNNL  60
QLPQKDDDEE DGMDGGGDEN DDDDEEEAEE NKQIDYYPTK SDEDEVEWHP KKQKLKSLIS  120
TYELAPRVPA PSVAATAPSV PKPSSGGRNS LTDWTERETF VLLDAWGDRF LQHGRKSLRC  180
EEWQQIAKMV SQVSKIERTD TQCRNRLDTL KKKYKKEKAK FPDSDGGACK WVYFKSMDEL  240
MASPPQQAGL SCGVDSGEYV FMNPRVHLNH ANGLDEMRDS PDNTESTGEE GSDGPQAKKR  300
KKRRGSGEAS SFRLLADSIQ KFSKIYEKIE NSKRQQMVEL EKMRMDFHKE LETQKRQILE  360
NLQCEISKLE QRNDDNDDSA ENGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1297301KKRKK
2297303KKRKKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN32602.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028192056.10.0trihelix transcription factor ASIL1-like
TrEMBLA0A445IF340.0A0A445IF34_GLYSO; Trihelix transcription factor ASIL2 isoform A
STRINGGLYMA13G43651.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-64Trihelix family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]