PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN32268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 379aa MW: 41978.1 Da PI: 7.797 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.3 | 1.3e-31 | 211 | 266 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W++eLH+rF++a++qLGG++ AtPk+i+elmkv+gLt+++vkSHLQk+Rl+ KHN32268.1 211 KQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLH 266 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.6E-28 | 208 | 269 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.783 | 208 | 268 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 6.81E-18 | 209 | 269 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.2E-27 | 211 | 266 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.2E-6 | 213 | 263 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MQFAQKMQPL KMGFLQYIEA LEEERRKIQV FPKELPLSLE LVTQAIEACR QQLAGTVAEY 60 NLNGQSECSE QTSTDGPVFE EFIPLKKRAS QDSVEEEDED EEHFHKHKKT ATDKKKSDWL 120 RSVQLWNPNP PPTKEDVVVP RKTDVVEVKR NGGAFQPFQR EEKSGDAKAS INNDASAIGK 180 APSSPPVPAT SSTGPVRVEN KKEEKGQAQR KQRRCWSQEL HKRFLHALQQ LGGADSATPK 240 QIRELMKVDG LTNDEVKSHL QKFRLHTRRS PIIHNNASSQ AGPLFLVGNI FVQPPEYAAV 300 ATTSTASGEE LTTVTTTTAP TGIYAPVAAH PPAVTHTLPI MKQKEHSHSE ERPNHSVLSN 360 SPASSSSTHT ITTSPPVPN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN32268.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT031180 | 0.0 | KT031180.1 Glycine max clone HN_CCL_160 MYB/HD-like transcription factor (Glyma02g10940.1) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003516846.1 | 0.0 | transcription factor HHO2 | ||||
Refseq | XP_028234117.1 | 0.0 | transcription factor HHO2-like | ||||
TrEMBL | A0A0B2RK22 | 0.0 | A0A0B2RK22_GLYSO; Transcription factor HHO3 | ||||
TrEMBL | I1J6P8 | 0.0 | I1J6P8_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA01G21900.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3918 | 33 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 3e-78 | G2-like family protein |
Publications ? help Back to Top | |||
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