PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN28146.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 321aa    MW: 36096.6 Da    PI: 6.189
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN28146.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.71.9e-311165155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                kprl+WtpeLH+rF ea++qLGG+e+AtPk+++++m+++gLtl+h+kSHLQkYRl
  KHN28146.1 11 KPRLKWTPELHQRFTEAINQLGGAERATPKSLMRVMGIPGLTLYHLKSHLQKYRL 65
                79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-29966IPR009057Homeodomain-like
SuperFamilySSF466894.3E-161066IPR009057Homeodomain-like
TIGRFAMsTIGR015576.9E-221166IPR006447Myb domain, plants
PfamPF002498.1E-81364IPR001005SANT/Myb domain
PfamPF143792.8E-22109154IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MMRLVLSTDA KPRLKWTPEL HQRFTEAINQ LGGAERATPK SLMRVMGIPG LTLYHLKSHL  60
QKYRLGKSQP LETCSDNKQQ GYCEIQNSDG HFSKEISIGT QNQMTESLKI AEALQMQMEV  120
QRKLNEQIEV QKHLQRRIEA QGKYLQSVLT KAHEALARHS SSTTGMELAK AELYQLESII  180
NNACPDSPLS ELTETRGLSL NCGERKQDRG TMCSLESSLT SSESSEQHTM DEAENPQKFN  240
GVSVELPLMS IHPEEDKAFK GDTSDGRKRS AATDSDHCVD QPCGNKLRKS EVSEMLDLNC  300
QYQRDIDSSV KEIDLNFSSS F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-211067158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-211067158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-211067158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-211067158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-211067158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-211067158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-211067158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-211067158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN28146.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0981690.0BT098169.1 Soybean clone JCVI-FLGm-12I23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001350646.10.0MYB-CC domain-containing transcription factor PHR11
RefseqXP_028241475.10.0myb family transcription factor PHL8-like
TrEMBLA0A445K0V70.0A0A445K0V7_GLYSO; Myb family transcription factor PHL8 isoform A
TrEMBLI1KMH30.0I1KMH3_SOYBN; Uncharacterized protein
STRINGGLYMA07G35700.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52183253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.12e-75G2-like family protein