PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN21079.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | C2H2 | ||||||||
Protein Properties | Length: 305aa MW: 32998.7 Da PI: 7.5447 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.9 | 0.0007 | 126 | 148 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H KHN21079.1 126 YECKTCNRTFPSFQALGGHRASH 148 99**********99999998887 PP | |||||||
2 | zf-C2H2 | 13.2 | 0.00026 | 213 | 235 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H KHN21079.1 213 HECSICGSEFTSGQALGGHMRRH 235 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.22E-8 | 125 | 148 | No hit | No description |
PROSITE profile | PS50157 | 10.305 | 126 | 153 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 5.7E-13 | 126 | 150 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.052 | 126 | 148 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 128 | 148 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 1.22E-8 | 208 | 235 | No hit | No description |
PROSITE profile | PS50157 | 10.076 | 213 | 240 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 2.2E-11 | 213 | 237 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.019 | 213 | 235 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 215 | 235 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MEGLDSNNST HNSIAKGKRT KRMRLLSPCG VVATTVTSST SSASSTTTYE SEEEDMANCL 60 ILLAQGGESR HHPRHDKQQV EDHGLENCDD GAIKTEEKGN SSNVNTTTAA TTTAANNNTK 120 VGFYIYECKT CNRTFPSFQA LGGHRASHKK PKLAAEEKKQ PLPPSPLPPP TPSQLQHMIV 180 TNYDRFEEGS VKSGPPISLQ LGNNGNNNKG KIHECSICGS EFTSGQALGG HMRRHRASTN 240 ANNVVDTTRC NTVITTTITA VPPRNILQLD LNLPAPEDDL REAKFQFTAT SQVLVGTPAL 300 VDCHY |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN21079.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028192752.1 | 1e-174 | zinc finger protein ZAT5-like | ||||
TrEMBL | A0A445HMN7 | 1e-172 | A0A445HMN7_GLYSO; Zinc finger protein ZAT5 | ||||
STRING | GLYMA12G08660.1 | 1e-172 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF586 | 34 | 141 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 9e-49 | C2H2 family protein |
Publications ? help Back to Top | |||
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