PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN15640.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 331aa    MW: 36496.4 Da    PI: 4.5845
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN15640.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.2e-16115163254
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                 +y+GVr++k +g+W++eI+ p +   + r++lg+f taeeA + ++a r++le
  KHN15640.1 115 KYRGVRQRK-WGKWASEIYNPFQ---NNRIWLGTFNTAEEASQVYEARRLELE 163
                 8*******9.********99654...38*******************999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.176115172IPR001471AP2/ERF domain
PfamPF008472.6E-10115164IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-14115162IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-19115163IPR001471AP2/ERF domain
SMARTSM003803.6E-13115178IPR001471AP2/ERF domain
CDDcd000186.46E-21115157No hitNo description
PRINTSPR003677.3E-10116127IPR001471AP2/ERF domain
PRINTSPR003677.3E-10138154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MPECQKQPAS RPKQKLHSLQ ESKAMRKLRI ICDDPDATDS SDDDSKRIQN PRIVKRSMCE  60
ISLLPLLHTF TTLETSSCEL NNKKNTMRVS TKGQPQSKKR VLTHTPSTRR KTPGKYRGVR  120
QRKWGKWASE IYNPFQNNRI WLGTFNTAEE ASQVYEARRL ELEAMAKAQA YKTGSGSAGE  180
PLATTSDKSN CCNSSAAAAA ADVSVSEKFS TTSDDIEESV LPHNSPPSVI EKGNVSTEEA  240
IEANYLVDDL AGLEIPDLSL LNLPPPPSTA GAAVPSGIEP NSGLDFDWLS FDDYEQVFDD  300
FGGLEDIHIS GFDDNEPSEL PDFDFGDFDA D
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN15640.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028242648.11e-165ethylene-responsive transcription factor ERF118-like
TrEMBLA0A0B2Q2T50.0A0A0B2Q2T5_GLYSO; Ethylene-responsive transcription factor ERF118
STRINGGLYMA17G18610.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-31ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]