PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN12381.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | CAMTA | ||||||||
Protein Properties | Length: 962aa MW: 107503 Da PI: 6.0717 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 168.7 | 8.9e-53 | 9 | 125 | 2 | 117 |
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 ++e ++rwlk+ e++ iL+n+ek+++t+e +++p+sgsl+L+n++++ryfr+DG++w+kk g+tv E+he+LKv +ve+l+cyYa++e+np fqrr+y KHN12381.1 9 HQEaQARWLKPAEVMYILQNHEKFQFTQEVPQQPTSGSLFLFNKRILRYFRRDGHNWRKKSGGRTVGEAHERLKVLNVEALNCYYARGEQNPAFQRRSY 107 677799********************************************************************************************* PP CG-1 100 wlLeeelekivlvhylev 117 w+L+ ++e+ivlvhy+++ KHN12381.1 108 WMLDPAYEHIVLVHYRNT 125 ****************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 76.975 | 5 | 131 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 8.4E-69 | 8 | 126 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 1.5E-45 | 11 | 124 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 2.3E-8 | 405 | 493 | IPR013783 | Immunoglobulin-like fold |
Pfam | PF01833 | 3.6E-7 | 408 | 481 | IPR002909 | IPT domain |
CDD | cd00102 | 4.08E-5 | 408 | 493 | No hit | No description |
SuperFamily | SSF81296 | 4.51E-18 | 408 | 491 | IPR014756 | Immunoglobulin E-set |
Gene3D | G3DSA:1.25.40.20 | 2.8E-16 | 603 | 698 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 15.751 | 604 | 696 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 1.03E-16 | 607 | 698 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 4.51E-14 | 609 | 696 | No hit | No description |
Pfam | PF12796 | 1.1E-8 | 620 | 698 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50088 | 11.06 | 637 | 669 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 0.0038 | 637 | 666 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 1300 | 676 | 705 | IPR002110 | Ankyrin repeat |
SMART | SM00015 | 83 | 754 | 776 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.437 | 756 | 784 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 4.25E-6 | 795 | 852 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 2.5 | 805 | 827 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.84 | 806 | 835 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.024 | 808 | 826 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 1.8E-4 | 828 | 850 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.212 | 829 | 854 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 2.9E-5 | 831 | 850 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 962 aa Download sequence Send to blast |
YEYDINDLHQ EAQARWLKPA EVMYILQNHE KFQFTQEVPQ QPTSGSLFLF NKRILRYFRR 60 DGHNWRKKSG GRTVGEAHER LKVLNVEALN CYYARGEQNP AFQRRSYWML DPAYEHIVLV 120 HYRNTSEGKL SSGAGAQLSP SSSVYTQSPS PYSTQNPGST SILGDSYEPN QSFSSPGSTK 180 VTSEIFVLNN KMGHMDWADT ESGTSSELEV TQALRRLEVQ LSLNEDNFED IVSFGSKHET 240 VHDSNPKHDQ RVISNQEQSA AFSRPDDQGL FYDGCNGRQD HGYPDANEKA LWTEQLESHK 300 SSSAVKLPQK NVYMPAENQE NSVSSARRVP VSNQENSHWL NFNCNNSENS VFSQPQGVDE 360 VKFPAYSSML ETQVINSDYY ETLFDQSQIG APPDANSSLT VAQKQKFTIK TISPEWGYAT 420 ETTKVIVVGS FLCHPSDSAW ACMFGDVEVP IEIIQDGVIS CEAPSHLPGK VTLCITSGNW 480 ESCSEVREFE YHDKTNSCTR CTQSETEATR SPEELLLLVR LGQMLLSAST IKNDNIESGI 540 PLIKPKADDD SWSHIIDALL VGSGTSSGTV DWLLEELLKD KFQQWLSFRS REKDEETGCS 600 LSKKEQGIIH MVAGLGFEWA LNPILTCGVN INFRDINGWT ALHWAARFGR EKMVASLIAS 660 GASAGAVTDP NAQDPTGKTA ASIAASSGHK GLAGYLSEIA VTSHLSSLTL EESESSKSSA 720 YLQADMTVNS VSKENLTANE DQASLKDTLA AIRNVTQAAA RIQSAFRSHS FRKRRAREAT 780 ASTGGIGTIS EISAMSKLAF RNSHEYNSAA LSIQKKYRGW KGRRDFLALR QKVVKIQAHV 840 RGYQVRKHYK VIWAVGILDK VVLRWRRKGA GLRGFRQEMD INENEDEDIL KVFRKQKLDV 900 EIEEAVSRVL SMVDSPDARE QYHRMLEKYR QAKAELAGTS DEASLSTSVG DDLFMDDFYP 960 FP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN12381.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT096537 | 0.0 | BT096537.1 Soybean clone JCVI-FLGm-10A15 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028243457.1 | 0.0 | calmodulin-binding transcription activator 4-like isoform X2 | ||||
Swissprot | Q9FYG2 | 0.0 | CMTA4_ARATH; Calmodulin-binding transcription activator 4 | ||||
TrEMBL | A0A445JCS8 | 0.0 | A0A445JCS8_GLYSO; Calmodulin-binding transcription activator 4 isoform A | ||||
STRING | GLYMA08G11080.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4548 | 29 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 0.0 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Publications ? help Back to Top | |||
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