PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHM98767.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Trihelix
Protein Properties Length: 396aa    MW: 45465.4 Da    PI: 4.3199
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHM98767.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix41.92.7e-13166250286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 Wt+qe+ +L++a  ++  + +r++l+   W++v+k + +  ++er+ +qC+++++ l+k+ykk+k+   +  ++   +++y+++++
  KHM98767.1 166 WTEQETFVLLDAWGDRFLQHGRKSLRCEEWQQVAKMVsQVSKIERTDTQCRNRLDTLKKKYKKEKAKFPDS-DGGACKWVYLKRMD 250
                 *************************************555789*************************995.778889******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.7E-5165230IPR009057Homeodomain-like
PfamPF138371.4E-19165252No hitNo description
PROSITE profilePS500906.237166223IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MDGIEDDARY PHNPYGYGYQ NSPYSPPVDT EYAHDDNDEN EQEQLEGDDE VDVDQSNNLQ  60
LPQEDAVDED GMYGGGDEND DNHDDDDDDE EEEEEEVVEV EENKQIDYYA IKSEDELEWH  120
PKKQKLKSLI STYELAPRVP APSSVAATAP TVPKPSSGGR NSLTDWTEQE TFVLLDAWGD  180
RFLQHGRKSL RCEEWQQVAK MVSQVSKIER TDTQCRNRLD TLKKKYKKEK AKFPDSDGGA  240
CKWVYLKRMD ELMSSPPQQA GLSCGLDSGE YVFMNTRVHL NHANGLDEMK DNPDNTESTG  300
EEDSDGPQAK KRKKRRGSGE ASSFRLLADS IQKFSKIYEK IENSKRQQMV ELEKMRKDFH  360
KELERQKRQI LENLQCEISK LEQRNDENND SAENGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1309313KKRKK
2309315KKRKKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHM98767.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028201456.10.0trihelix transcription factor ASIL1-like
TrEMBLA0A0B2NU890.0A0A0B2NU89_GLYSO; Trihelix transcription factor ASIL2
STRINGGLYMA15G01730.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.11e-64Trihelix family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]