PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4U37661.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family B3
Protein Properties Length: 146aa    MW: 17047.2 Da    PI: 9.6889
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4U37661.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.57.3e-11481143395
                    -SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
             B3  33 sktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                    ++++t  d++g++W+++l++rk+      ++  + W+ Fvk  gL++gD v+F+ +++   ++  ++
  Jcr4U37661.10  48 KQKITSFDQDGKEWTFRLSIRKNEIYskpTFTPASWRPFVKYFGLRDGDGVIFYIEKDdGARKIQIR 114
                    45788889**********885554444558888*********************9887566655555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508639.4741117IPR003340B3 DNA binding domain
SuperFamilySSF1019361.79E-945106IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.105.3E-1045108IPR015300DNA-binding pseudobarrel domain
PfamPF023625.6E-847113IPR003340B3 DNA binding domain
CDDcd100173.46E-1055114No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MTKLDPEIKS DXXXXXXXXX XXXXXXXXXX XXEFLNEPAV LNESGEFKQK ITSFDQDGKE  60
WTFRLSIRKN EIYSKPTFTP ASWRPFVKYF GLRDGDGVIF YIEKDDGARK IQIRGLRKIN  120
CMLLGNRPWA EVKKVENQAS TSHYKA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021649266.11e-27uncharacterized protein LOC110641745
TrEMBLA0A067L2T41e-82A0A067L2T4_JATCU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15290312